Xanthomonas campestris pv. badrii NEB122 |
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Putative Xanthomonas campestris pv. badrii NEB122 RM systems
Ref: Wu,V. unpublished
REBASE ref # 30165
Complete sequence: 4,955,824 bp
GenBank #: CP051651
REBASE acronym: Xba
Org_num: 3059
All begin HG421_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4250 | restriction endonuclease | |||
| 4255 | M | M.Xor645ORF6335P (97% identity) | AGCANNNNNNTGA | M.XbaII |
| 4260 | 144 aa hypothetical protein | |||
| ??? | S | S.XorCIATORF17110P (62% identity) | AGCANNNNNNTGA | S.XbaII |
| 4270 | abortive infection family protein | |||
| 4275 | 224 aa hypothetical protein | |||
| 4280 | R | Xca33086ORF18150P (97% identity) | AGCANNNNNNTGA | XbaIIP |
| 4285 | 99 aa hypothetical protein | |||
| 12875 | restriction endonuclease subunit S | |||
| 12880 | M | M.XarDW3F3ORF15065P (97% identity) | CCAGNNNNNGGT | M.XbaIII |
| 12885 | virulence RhuM family protein | |||
| 12890 | S | S.Xca17ORF10095P (82% identity) | CCAGNNNNNGGT | S.XbaIII |
| 12895 | R | Xcu456ORF5330P (96% identity) | CCAGNNNNNGGT | XbaIIIP |
| 12900 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3830 | molybdenum cofactor biosynthesis protein MoaE | |||
| 3840 | M | M1.Xci2DORF5475P (99% identity) | M1.XbaORF3845P | |
| 3845 | M | M2.Xci2DORF5475P (99% identity) | M2.XbaORF3845P | |
| 3850 | RM | Xci2DORF5475P (99% identity) | XbaORF3845P | |
| 3855 | 224 aa hypothetical protein | |||
| 10150 | IS5 family transposase | |||
| 10155 | M | M.CbaAAWORFGP (53% identity) | TCTAGA | M.XbaI |
| 10160 | R | TspQ5ORF16710P (69% identity) | TCTAGA | XbaI |
| 10165 | 111 aa hypothetical protein | |||
| 16035 | DUF1629 domain-containing protein | |||
| 16040 | M | M.Xho16734ORF4462P (98% identity) | CRCCGGYG | M.XbaIV |
| 16045 | helix-turn-helix transcriptional regulator | |||
| 16050 | R | LguH3ORF16585P (78% identity) | CRCCGGYG | XbaIVP |
| 16055 | integrase arm-type DNA-binding domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4245 | type II toxin-antitoxin system RelE/ParE family | |||
| 4250 | R | Xna8853MrrP (99% identity) | XbaMrr2P | |
| 4255 | SAM-dependent DNA methyltransferase | |||
| 18645 | 549 aa hypothetical protein | |||
| 18650 | R | Xar1832MrrP (88% identity) | XbaMrrP | |
| 18655 | 295 aa hypothetical protein | |||