Pseudomonas species OM2164 |
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Putative Pseudomonas species OM2164 RM systems
Ref: Wu,V. unpublished
REBASE ref # 30165
| Sequence length: | GenBank #: | |
| Chromosome: | 3,204,673 bp | CP051542 |
| plasmid pPspOM44: | 43,005 bp | CP051544 |
REBASE acronym: PspOM
Org_num: 2113
All begin HGN31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | 130 aa hypothetical protein | |||
| 1940 | M | M.SspZ26ORF15355P (60% identity) | CCANNNNNNNCTCG | M.PspOMV |
| ??? | S | S.SspZ26ORF15355P (49% identity) | CCANNNNNNNCTCG | S.PspOMV |
| 1955 | redox-regulated ATPase YchF | |||
| 15090 | M48 family metallopeptidase | |||
| 15095 | R | PspS343ORF5995P (97% identity) | TACNNNNNGGT | PspOMIIIP |
| 15100 | DUF3800 domain-containing protein | |||
| 15105 | S | S.Sdu109990ORF4121P (49% identity) | TACNNNNNGGT | S.PspOMIII |
| 15110 | M | M.Pfe100066ORF3740P (98% identity) | TACNNNNNGGT | M.PspOMIII |
| 15115 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | 69 aa hypothetical protein | |||
| ??? | M | M.PspOMVI (60% identity) | M.PspOMORF1810P | |
| 1820 | 94 aa hypothetical protein | |||
| 1805 | 69 aa hypothetical protein | |||
| 1810 | M | M.PspOMORF1810P (60% identity) | CCWGG | M.PspOMVI |
| 1815 | site-specific DNA-methyltransferase | |||
| 1810 | DNA cytosine methyltransferase | |||
| 1815 | M | M2.RspA2ORFJP (94% identity) | M.PspOMORF1815P | |
| 1820 | 94 aa hypothetical protein | |||
| 7435 | phage terminase large subunit family protein | |||
| 7440 | M | M.Tfr970ORF2124P (62% identity) | GGGCCC | M.PspOMI |
| 7445 | R | RsoX05ORF1213P (65% identity) | GGGCCC | PspOMI |
| 7450 | DUF262 domain-containing protein | |||
| 10480 | ribonuclease HII | |||
| 10485 | M | M.PcoRK1II (87% identity) | GANTC | M.PspOMIV |
| 10490 | alkane 1-monooxygenase | |||
| plasmid pPspOM44 | ||||
| 16170 | 46 aa hypothetical protein | |||
| 16175 | RM | PspAK26ORF14100P (90% identity) | CGCCCAR | PspOMII |
| 16180 | transposase | |||