Parascardovia denticolens NCTC12937 |
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Putative Parascardovia denticolens NCTC12937 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,830,728 bp
GenBank #: UFTI00000000 (NZ_UFTI00000000)
REBASE acronym: Pde12937
Org_num: 41602
All begin NCTC12937_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | Uncharacterised protein | |||
| 2 | M | M.Sin12537ORF365P (100% identity) | M.Pde12937ORF2P | |
| 3 | R | Sin12537ORF365P (73% identity) | Pde12937ORF2P | |
| 4 | HsdR-like protein of type I restriction | |||
| 1212 | Uncharacterised protein | |||
| 1213 | R | Sin12537ORF365P (100% identity) | AGCNNNNNGGT | Pde12937IP |
| 1214 | M | M.Sin12537ORF365P (100% identity) | AGCNNNNNGGT | M.Pde12937I |
| 1215 | S | S1.Sin12537ORF365P (100% identity) | AGCNNNNNGGT | S1.Pde12937I |
| 1216 | integrase protein | |||
| 1217 | S | S2.Sin12537ORF365P (98% identity) | S2.Pde12937IP | |
| 1218 | ABC transporter substrate-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 38 | Uncharacterised protein | |||
| 39 | M | Sin12537ORF693AP (100% identity) | M1.Pde12937ORF39P | |
| 40 | M | Sin12537ORF693BP (100% identity) | M2.Pde12937ORF39P | |
| 41 | RM | Sin12537ORF693CP (100% identity) | Pde12937ORF39P | |
| 42 | Uncharacterised protein | |||
| 255 | sodium/dicarboxylate symporter family protein | |||
| 256 | RM | Sin12537ORF902P (100% identity) | Pde12937ORF256P | |
| 257 | Uncharacterised protein | |||
| 682 | pre-pilin peptidase or phosphoesterase | |||
| 683 | R | Sin12537ORF1296P (100% identity) | GATC | Pde12937IIP |
| 684 | M | M.Sin12537ORF1296P (100% identity) | GATC | M.Pde12937II |
| 685 | Uncharacterized conserved protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1172 | Uncharacterised protein | |||
| 1173 | R | Sin12537McrBP (100% identity) | Pde12937McrBP | |
| 1174 | R | Sin12537McrCP (100% identity) | Pde12937McrCP | |
| 1175 | type III restriction system methylase | |||