Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 2,284,162 bp

GenBank #: UATE00000000 (NZ_UATE00000000)

REBASE acronym: Nme9390

Org_num: 41574

 

All begin NCTC9390_

Type I
ORF Gene Most similar Specificity Name
 
1968 ABC transporter ATP-binding protein
1969 M M.NflHORF1839P (100% identity) ACGNNNNNNRTGG M.Nme9390II
1970 DNA-binding protein
1971 S S.NflHORF1839P (100% identity) ACGNNNNNNRTGG S.Nme9390II
1972 R NflHORF1839P (99% identity) ACGNNNNNNRTGG Nme9390IIP
1973 thioredoxin
 
784 NadB protein
785 M M.NflHORF1083P (100% identity) CRTANNNNNNRTTT M.Nme9390IV
??? S S.NflHORF1083P (100% identity) CRTANNNNNNRTTT S.Nme9390IV
787 R NflHORF1083P (100% identity) CRTANNNNNNRTTT Nme9390IVP
788 molybdopterin-guanine dinucleotide
Type II
ORF Gene Most similar Specificity Name
 
1341 UDP-N-acetylmuramate:
1342 RM Nfl8263I (100% identity) GCGGAG Nme9390I
1343 Virus attachment protein p12 family
 
170 leucyl-tRNA synthetase
??? M M2.NflHORF1952P (99% identity) GATC M1.Nme9390III
172 M M1.NflHORF1952P (100% identity) GATC M2.Nme9390III
173 Methyl-directed mismatch repair protein
174 C C.Nfl8263IIIP (100% identity) C.Nme9390IIIP
175 aldehyde dehydrogenase A
 
1609 carboxy-terminal processing protease
1610 H H.NflHORF1268P (100% identity) H.Nme9390ORF1612P
1611 R NflHORF1268P (100% identity) Nme9390ORF1612P
1612 M M.NflHORF1268P (100% identity) M.Nme9390ORF1612P
1613 DNA repair protein RadA
 
1685 dinucleoside polyphosphate hydrolase
1686 V V.NflHIIP (100% identity) V.Nme9390ORF1687P
1687 M M.Nfl8263ORF684P (100% identity) CCGG M.Nme9390ORF1687P
1688 R NflHII (100% identity) CCGG Nme9390ORF1687P
1689 DNA topoisomerase IV subunit B
 
604 tellurite resistance protein TehA
605 M M.NflHORF697P (98% identity) GCGCGC M.Nme9390ORF605P
606 R NflHORF697P (100% identity) GCGCGC Nme9390ORF605P
607 alanyl-tRNA synthetase
 
708 FMN oxidoreductase CC3083
709 S S.NflHORF1491P (39% identity) S2.Nme9390ORF711P
710 S S.NflHORF1491P (51% identity) S1.Nme9390ORF711P
711 RM NflHORF1491P (100% identity) CGANNNNNNTGC Nme9390ORF711P
712 pseudouridine synthase
 
725 3-isopropylmalate dehydrogenase
726 R NflHORF897P (100% identity) GGNNCC Nme9390ORF727P
727 M M.Npo43768ORF501P (100% identity) GGNNCC M.Nme9390ORF727P
728 3-isopropylmalate dehydratase small
 
839 DNA helicase
840 M M.NflHORF2575P (100% identity) GATATC M.Nme9390V
841 R NflHORF2575P (100% identity) GATATC Nme9390VP
842 ATP-dependent DNA helicase
Type III
ORF Gene Most similar Specificity Name
 
2124 prolyl endopeptidase
2125 M M.Nfl8263ORF1765P (100% identity) M.Nme9390ORF2125P
2126 R NflHORF568P (100% identity) Nme9390ORF2125P
2127 acyl carrier protein
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