Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 2,456,245 bp

GenBank #: UATD00000000 (NZ_UATD00000000)

REBASE acronym: Nme8249

Org_num: 41572

 

All begin NCTC8249_

Type II
ORF Gene Most similar Specificity Name
 
2193 IS1106 transposase
??? M M.Nme23347ORFCP (100% identity) CCGG M.Nme8249ORF2194P
2195 R Nme22293ORFLP (100% identity) CCGG Nme8249ORF2194P
2196 V V.NmeS4ORFFP (100% identity) V.Nme8249ORF2194P
2197 ATP-dependent helicase
 
2197 ATP-dependent helicase
2198 R Nci871ORF1160P (81% identity) Nme8249ORF2199P
2199 M M.Nmu2444ORFDP (97% identity) M.Nme8249ORF2199P
2200 ATP-dependent DNA helicase
 
38 transcriptional accessory protein Tex
??? M M1.NmeMC58ORF76P (100% identity) GGTGA M1.Nme8249ORF39P
40 M M2.NmeMC58ORF76P (98% identity) M2.Nme8249ORF39P
41 UDP-glucose 4-epimerase, truncation
 
2319 leucyl-tRNA synthetase
??? M DNA adenine methylase, partial GATC M1.Nme8249I
2321 M modification methylase DpnIIB GATC M2.Nme8249I
2322 Uncharacterised protein
 
766 phenylalanyl-tRNA synthetase subunit alpha
??? V V.NmeS4ORFGP (100% identity) V.Nme8249ORF768P
768 M M.NmeS4ORFGP (99% identity) RCCGGY M.Nme8249ORF768P
769 R NmeS4ORFGP (100% identity) RCCGGY Nme8249ORF768P
770 phenylalanyl-tRNA synthetase subunit beta
 
861 DP-heptose synthetase
862 M M.NmeW135ORF855P (98% identity) CCWGG M.Nme8249ORF862P
863 R NmeS4ORFEP (98% identity) CCWGG Nme8249ORF862P
864 ADP-L-glycero-D-manno-heptose-6-epimerase
 
1238 3-isopropylmalate dehydratase small
1239 M M.NmeMC58ORF1033P (100% identity) GGNNCC M.Nme8249ORF1239P
1240 R Nme95IIP (100% identity) GGNNCC Nme8249ORF1239P
1241 3-isopropylmalate dehydrogenase
 
1505 phage associated protein
1506 M M.Nme6455ORF676P (98% identity) M.Nme8249ORF1506P
1507 Protein traR
 
1658 alanyl-tRNA synthetase
1659 R NmeS4ORFCP (100% identity) GCGCGC Nme8249ORF1660P
1660 M M.NmeS4ORFCP (100% identity) GCGCGC M.Nme8249ORF1660P
1661 IS1106A3 transposase
Type III
ORF Gene Most similar Specificity Name
 
1250 C32 tRNA thiolase
1251 R Nme8669ORF1516P (99% identity) Nme8249ORF1254P
1252 M M.NmeMC58ORF1261P (44% identity) M.Nme8249ORF1254BP
1253 IS1106A3 transposase
1254 M M.NmeA153ORF1980P (44% identity) M.Nme8249ORF1254AP
1255 peptidyl-prolyl cis-trans isomerase A
 
1365 tRNA pseudouridine synthase B
1366 M M.NmeA710ORF1526P (47% identity) M.Nme8249ORF1366AP
1367 Transposase and inactivated derivatives
1368 M M.NmeW135ORF395P (48% identity) M.Nme8249ORF1366BP
1369 R Nme38277IP (100% identity) Nme8249ORF1366P
1370 L-lactate dehydrogenase