Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 2,285,339 bp

GenBank #: UGRV00000000 (NZ_UGRV00000000)

REBASE acronym: Nme6455

Org_num: 41571

 

All begin NCTC6455_

Type II
ORF Gene Most similar Specificity Name
 
6 leucyl-tRNA synthetase
??? M DNA adenine methylase, partial GATC M1.Nme6455III
8 M modification methylase DpnIIB GATC M2.Nme6455III
9 Uncharacterised protein
 
357 phenylalanyl-tRNA synthetase subunit alpha
358 V V.NmeS4ORFGP (100% identity) V.Nme6455ORF359P
??? M M.NmeS4ORFGP (100% identity) RCCGGY M.Nme6455ORF359P
360 R NmeS4ORFGP (100% identity) RCCGGY Nme6455ORF359P
361 phenylalanyl-tRNA synthetase subunit beta
 
454 DP-heptose synthetase
455 M M.NmeW135ORF855P (100% identity) CCWGG M.Nme6455ORF455P
456 R NmeS4ORFEP (98% identity) CCWGG Nme6455ORF455P
457 ADP-L-glycero-D-manno-heptose-6-epimerase
 
531 IS1106 transposase
532 M M.NmeS4ORFCP (98% identity) GCGCGC M.Nme6455ORF532P
533 R NmeS4ORFCP (100% identity) GCGCGC Nme6455ORF532P
534 alanyl-tRNA synthetase
 
675 Protein traR
676 M M.Nme8249ORF1506P (98% identity) M.Nme6455ORF676P
677 phage associated protein
 
895 3-isopropylmalate dehydrogenase
896 R NmeS4ORFHP (100% identity) Nme6455ORF898BP
897 R NmeW135ORF659P (21% identity) Nme6455ORF898AP
??? M M.NmeMBW2ORFJP (100% identity) M.Nme6455ORF898P
901 3-isopropylmalate dehydratase small
 
1752 ATP-dependent DNA helicase
1753 R Nme212IP (100% identity) GTSAC Nme6455IP
1754 M M.Nme212I (100% identity) GTSAC M.Nme6455I
1755 ATP-dependent helicase
 
1755 ATP-dependent helicase
1756 V V.NmeS4ORFFP (100% identity) V.Nme6455ORF1758P
1757 R NmeS4ORFFP (100% identity) CCGG Nme6455ORF1758P
1758 M M.NmeS4ORFFP (95% identity) CCGG M.Nme6455ORF1758P
1759 transposase for IS1655
 
1976 site-specific DNA methylase, truncation
1977 M M1.NmeM395ORFJP (100% identity) GGTGA M.Nme6455ORF1977P
1978 transcriptional accessory protein Tex
 
2199 IS1106 transposase
??? M adenine/cytosine DNA methyltransferase CCTTC M.Nme6455II
2201 R Uncharacterised protein CCTTC Nme6455IIP
2202 Uncharacterised protein
Type III
ORF Gene Most similar Specificity Name
 
775 L-lactate dehydrogenase
776 R Nme212ORF8855P (100% identity) Nme6455ORF777P
??? M M.Nme212ORF8855P (98% identity) M.Nme6455ORF777P
779 tRNA pseudouridine synthase B
 
884 peptidyl-prolyl cis-trans isomerase A
885 M M.Nme212ORF9485P (100% identity) CCACC M.Nme6455ORF885P
886 R Nme212ORF9485P (100% identity) CCACC Nme6455ORF885P
887 C32 tRNA thiolase