Neisseria lactamica NCTC10618 |
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Putative Neisseria lactamica NCTC10618 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,106,061 bp
GenBank #: UGRN00000000 (NZ_UGRN00000000)
REBASE acronym: Nla10618
Org_num: 41569
All begin NCTC10618_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 440 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 441 | M | M.Nla1009ORF6195P (98% identity) | CAGNNNNNGTC | M.Nla10618II |
| 442 | DNA-damage-inducible protein D | |||
| 443 | S | S.Nla1009ORF6195P (98% identity) | CAGNNNNNGTC | S2.Nla10618II |
| 444 | R | Nla1009ORF6195P (99% identity) | CAGNNNNNGTC | Nla10618IIP |
| 445 | ATP-dependent protease ATP-binding protein | |||
| 768 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 769 | M | M.NlaA7515ORF175P (100% identity) | CACNNNNCTT | M.Nla10618III |
| 770 | S | S.NlaA7515ORF175P (100% identity) | CACNNNNCTT | S.Nla10618III |
| 771 | DNA-binding protein | |||
| 772 | R | NlaA7515ORF175P (99% identity) | CACNNNNCTT | Nla10618IIIP |
| 773 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | leucyl-tRNA synthetase | |||
| 15 | R | NlaA7515ORF1494P (100% identity) | GATC | Nla10618ORF15P |
| ??? | 139 aa hypothetical protein NEILACOT_03814 | |||
| 15 | type II restriction endonuclease | |||
| ??? | M | M.Nla10617ORF1876P (100% identity) | M.Nla10618ORFAP | |
| 16 | leucyl-trna synthetase, truncation | |||
| 338 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 339 | V | V.NlaY92ORF16400P (98% identity) | V.Nla10618ORF340P | |
| 340 | M | M.NlaL17ORFAP (96% identity) | M.Nla10618ORF340P | |
| 341 | phenylalanyl-tRNA synthetase subunit beta | |||
| 437 | DP-heptose synthetase | |||
| 438 | M | M.NlaCORFHP (99% identity) | CCWGG | M.Nla10618ORF438P |
| 439 | R | NlaCORFHP (98% identity) | CCWGG | Nla10618ORF438P |
| 440 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 543 | Uncharacterised protein | |||
| 544 | M | M.NlaCORFRP (99% identity) | M.Nla10618ORF544P | |
| 545 | R | Nla17106ORFCP (86% identity) | CCGCGG | Nla10618ORF544P |
| 546 | excinuclease ABC subunit A | |||
| 648 | Uncharacterised protein | |||
| 649 | M | M.NlaCORFAP (100% identity) | M.Nla10618ORF649P | |
| 650 | Mu-like prophage protein Com | |||
| 786 | 3-isopropylmalate dehydratase small | |||
| 787 | R | Nla17106ORFMP (99% identity) | Nla10618ORF788P | |
| 788 | M | M.Nla17106ORFMP (98% identity) | M.Nla10618ORF788P | |
| 789 | 3-isopropylmalate dehydrogenase | |||
| 1625 | L-serine dehydratase | |||
| 1626 | M | M.NlaA7515ORF1074P (99% identity) | CCNGG | M.Nla10618ORF1626P |
| 1627 | R | Nla10616ORF1631P (99% identity) | CCNGG | Nla10618ORF1626P |
| 1628 | modification methylase | |||
| 1627 | restriction endonuclease | |||
| 1628 | M | M.Nla17106ORFKP (99% identity) | CATG | M.Nla10618I |
| 1629 | R | R2.Nla17106ORFKP (100% identity) | CATG | Nla10618IP |
| 1634 | glutathione-regulated potassium-efflux system | |||
| 1667 | integral membrane protein | |||
| 1668 | R | NlaA7515ORF1110P (100% identity) | GGCC | Nla10618ORF1669P |
| 1669 | M | M.NlaA7515ORF1110P (100% identity) | GGCC | M.Nla10618ORF1669P |
| 1670 | ribosome recycling factor | |||
| 1928 | DNA helicase | |||
| 1929 | M | M.Nme8013ORF2208P (99% identity) | M.Nla10618ORF1929P | |
| 1930 | R | Nme8013ORF2208P (100% identity) | Nla10618ORF1929P | |
| 1931 | ATP-dependent DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 477 | 50S ribosomal protein L25 | |||
| 478 | M | M.Nla10617ORF302P (81% identity) | M.Nla10618ORF478P | |
| 479 | R | Nla10616ORF532P (98% identity) | Nla10618ORF478P | |
| 480 | D-alanyl-D-alanine carboxypeptidase | |||
| 608 | Transposase and inactivated derivatives | |||
| ??? | M | M.Nla10618ORF1287P (100% identity) | M.Nla10618ORF609P | |
| 611 | R | Nla10618ORF1287P (100% identity) | Nla10618ORF609P | |
| 612 | Uncharacterised protein | |||
| 798 | C32 tRNA thiolase | |||
| 799 | R | Nla10616ORF809P (99% identity) | Nla10618ORF800P | |
| 800 | M | M.Nla10616ORF809P (86% identity) | M.Nla10618ORF800P | |
| 801 | peptidyl-prolyl cis-trans isomerase A | |||
| 918 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Nme22425ORFJP (96% identity) | M.Nla10618ORF920P | |
| 921 | R | Nsp6792ORFAP (96% identity) | Nla10618ORF920P | |
| 922 | L-lactate dehydrogenase | |||
| 1285 | Protein of uncharacterised function (DUF1260) | |||
| 1286 | R | Nla10618ORF609P (100% identity) | Nla10618ORF1287P | |
| ??? | M | M.Nla10618ORF609P (100% identity) | M.Nla10618ORF1287P | |
| 1289 | Transposase and inactivated derivatives | |||