Neisseria lactamica NCTC10616 |
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Putative Neisseria lactamica NCTC10616 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,185,892 bp
GenBank #: UGRO00000000 (NZ_UGRO00000000)
REBASE acronym: Nla10616
Org_num: 41568
All begin NCTC10616_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 774 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 775 | M | M.NlaCORFNP (99% identity) | GACNNNNNTAA | M.Nla10616II |
| ??? | S | S.NlaCORFNP (63% identity) | GACNNNNNTAA | S.Nla10616II |
| 777 | DNA-binding protein | |||
| 778 | R | NlaA7515ORF175P (99% identity) | GACNNNNNTAA | Nla10616IIP |
| 779 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32 | leucyl-tRNA synthetase | |||
| 33 | R | NlaA7515ORF1494P (100% identity) | GATC | Nla10616ORF33P |
| ??? | 139 aa hypothetical protein NEILACOT_03814 | |||
| 33 | type II restriction endonuclease | |||
| ??? | M | M.Nla10618ORFAP (100% identity) | M.Nla10616ORFAP | |
| 34 | leucyl-trna synthetase, truncation | |||
| 375 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 376 | V | V.Nla17106ORFAP (100% identity) | V.Nla10616ORF377P | |
| 377 | M | M.Nla17106ORFAP (93% identity) | M.Nla10616ORF377P | |
| 378 | phenylalanyl-tRNA synthetase subunit beta | |||
| 795 | 3-isopropylmalate dehydratase small | |||
| 796 | M | M.Npo43768ORF501P (99% identity) | GGNNCC | M.Nla10616ORF796P |
| 797 | R | NlaIV (99% identity) | GGNNCC | Nla10616ORF796P |
| 798 | 3-isopropylmalate dehydrogenase | |||
| 1630 | L-serine dehydratase | |||
| 1631 | M | M.Nla17106ORFJP (99% identity) | CCNGG | M.Nla10616ORF1631P |
| 1632 | R | Nla10618ORF1626P (99% identity) | CCNGG | Nla10616ORF1631P |
| 1633 | modification methylase | |||
| 1632 | restriction endonuclease | |||
| 1633 | M | M.NlaIII (99% identity) | CATG | M.Nla10616I |
| 1634 | R | R2.Nla17106ORFKP (100% identity) | CATG | Nla10616IP |
| 1639 | glutathione-regulated potassium-efflux system | |||
| 1659 | integral membrane protein | |||
| 1660 | R | NlaA7515ORF1110P (100% identity) | GGCC | Nla10616ORF1661P |
| 1661 | M | M.NlaA7515ORF1110P (100% identity) | GGCC | M.Nla10616ORF1661P |
| 1662 | ribosome recycling factor | |||
| 1902 | Protein of uncharacterised function (DUF533) | |||
| 1903 | M | M.Nme9714ORF1637P (100% identity) | M.Nla10616ORF1903P | |
| 1904 | R | NlaA7515ORF1347P (100% identity) | Nla10616ORF1903P | |
| 1905 | ATP-dependent DNA helicase DinG | |||
| 1931 | DNA helicase | |||
| 1932 | M | M.NlaA7515ORF1374P (100% identity) | M.Nla10616ORF1932P | |
| ??? | R | NlaA7515ORF1374P (100% identity) | Nla10616ORF1932P | |
| 1935 | ATP-dependent DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | 50S ribosomal protein L25 | |||
| ??? | M | M.NlaCORFKP (95% identity) | M.Nla10616ORF532P | |
| 533 | R | Nla17106ORFBP (98% identity) | Nla10616ORF532P | |
| 534 | D-alanyl-D-alanine carboxypeptidase | |||
| 807 | C32 tRNA thiolase | |||
| 808 | R | NlaA7515ORF207P (99% identity) | Nla10616ORF809P | |
| 809 | M | M.Nla17106ORFEP (98% identity) | M.Nla10616ORF809P | |
| 810 | peptidyl-prolyl cis-trans isomerase A | |||
| 936 | tRNA pseudouridine synthase B | |||
| ??? | M | M.NmeMC58I (96% identity) | M.Nla10616ORF939P | |
| 940 | R | NlaCORFBP (99% identity) | Nla10616ORF939P | |
| 941 | L-lactate dehydrogenase | |||