Neisseria gonorrhoeae NCTC8254 |
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Putative Neisseria gonorrhoeae NCTC8254 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,182,674 bp
GenBank #: UGRA00000000 (NZ_UGRA00000000)
REBASE acronym: Ngo8254
Org_num: 41567
All begin NCTC8254_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 408 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| ??? | M | M.NgoPID18ORF652P (99% identity) | M.Ngo8254ORF410P | |
| 411 | DNA-damage-inducible protein D | |||
| 412 | S | S.NgoWNII (50% identity) | GCANNNNNNNNTGC | S1.Ngo8254ORF410P |
| 413 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo8254ORF410P |
| 414 | R | Ngo5734ORF2400P (99% identity) | Ngo8254ORF410P | |
| 415 | ATP-dependent protease ATP-binding protein | |||
| 951 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 952 | M | M.Ngo3648ORFEP (100% identity) | GAGNNNNNTAC | M.Ngo8254III |
| 953 | Uncharacterised protein | |||
| 954 | Uncharacterised protein | |||
| 955 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo8254III |
| 956 | DNA-binding protein | |||
| 957 | R | Ngo3648ORFEP (99% identity) | GAGNNNNNTAC | Ngo8254IIIP |
| 958 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| ??? | M | M1.Ngo49226ORF35P (100% identity) | GATC | M1.Ngo8254IV |
| ??? | M | M.NgoWPORF8P (100% identity) | GATC | M2.Ngo8254IV |
| 9 | Uncharacterised protein | |||
| 301 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 302 | V | V.NgoWSORF391P (100% identity) | V.Ngo8254ORF303P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo8254ORF303P | |
| 305 | R | Npo18661ORFHP (100% identity) | Ngo8254ORF303P | |
| 306 | phenylalanyl-tRNA synthetase subunit beta | |||
| 359 | Transposase and inactivated derivatives | |||
| 360 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo8254ORF360P |
| 361 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo8254ORF360P |
| 362 | secreted protein | |||
| 366 | uroporphyrinogen decarboxylase | |||
| 367 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo8254ORF370P | |
| ??? | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo8254ORF370P |
| 370 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo8254ORF370P |
| 371 | Uncharacterised protein | |||
| 720 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 721 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo8254ORF722P |
| 722 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo8254ORF722P |
| 723 | anthranilate synthase component I | |||
| 980 | 3-isopropylmalate dehydratase small | |||
| 981 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo8254ORF981P |
| ??? | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo8254ORF981P |
| 984 | 3-isopropylmalate dehydrogenase | |||
| 1559 | phage replication initiation protein | |||
| 1560 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo8254ORF1563P | |
| ??? | R | Ngos1291ORF65P (100% identity) | Ngo8254ORF1563P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo8254ORF1563P | |
| 1564 | Uncharacterised protein | |||
| 1589 | ATP-dependent DNA helicase | |||
| 1590 | R | Ngo207IIP (100% identity) | CCTC | R1.Ngo8254IIP |
| 1591 | R | R2.Ngo206IP (94% identity) | CCTC | R2.Ngo8254IIP |
| 1592 | M | M2.Ngo207IIP (100% identity) | CCTC | M1.Ngo8254II |
| 1593 | M | M1.Ngo207II (100% identity) | CCTC | M2.Ngo8254II |
| 1594 | ATP dependent DNA helicase | |||
| 1602 | excinuclease ABC subunit A | |||
| 1603 | R | Ngos1291ORF260P (99% identity) | CCGCGG | Ngo8254ORF1604P |
| 1604 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo8254ORF1604P |
| 1605 | type I restriction-modification system | |||
| 1865 | protein CysS | |||
| 1866 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo8254ORF1867P |
| 1867 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.Ngo8254ORF1867P |
| 1868 | GTPase ObgE | |||
| 1974 | transcriptional accessory protein Tex | |||
| 1975 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo8254VP |
| 1976 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo8254V |
| 1977 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo8254VP |
| 1978 | glutamate permease | |||
| 2076 | ribosome recycling factor | |||
| 2077 | M | M.Ngos1291ORF3515P (99% identity) | GGCC | M.Ngo8254ORF2077P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo8254ORF2077P |
| 2080 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1014 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Nme25462ORF5410P (94% identity) | M.Ngo8254ORF1016P | |
| 1017 | R | Ngo2679ORFAP (100% identity) | Ngo8254ORF1016P | |
| 1018 | L-lactate dehydrogenase | |||
| 1110 | C32 tRNA thiolase | |||
| 1111 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo8254IP |
| 1112 | M | M.Ngos1291ORF8455P (99% identity) | CCACC | M.Ngo8254I |
| 1113 | peptidyl-prolyl cis-trans isomerase A | |||