Neisseria gonorrhoeae NCTC13821 |
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Putative Neisseria gonorrhoeae NCTC13821 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,233,093 bp
GenBank #: UGRD00000000 (NZ_UGRD00000000)
REBASE acronym: Ngo13821
Org_num: 41566
All begin NCTC13821_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 511 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 512 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo13821ORF512P | |
| 513 | DNA-damage-inducible protein D | |||
| ??? | S | S.NgoJH9ORFNP (100% identity) | GCANNNNNNNNTGC | S1.Ngo13821ORF512P |
| 515 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo13821ORF512P |
| 516 | R | NgoNCORF566P (100% identity) | Ngo13821ORF512P | |
| 517 | ATP-dependent protease ATP-binding protein | |||
| 1060 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 1061 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo13821II |
| 1062 | Uncharacterised protein | |||
| 1063 | Uncharacterised protein | |||
| 1064 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo13821II |
| 1065 | DNA-binding protein | |||
| 1066 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo13821IIP |
| 1067 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo13821ORF8P |
| ??? | M | M.NgoWPORF8P (100% identity) | M.Ngo13821ORF8P | |
| 9 | Uncharacterised protein | |||
| 208 | Uncharacterised protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo13821ORF209P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo13821ORF209P | |
| 212 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13821ORF209P | |
| 213 | phage replication initiation protein | |||
| 278 | type I restriction-modification system | |||
| 279 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo13821ORF279P |
| 280 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo13821ORF279P |
| 281 | excinuclease ABC subunit A | |||
| 405 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 406 | V | V.NgoWSORF391P (100% identity) | V.Ngo13821ORF407P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13821ORF407P | |
| 409 | R | NgoWSORF391P (100% identity) | Ngo13821ORF407P | |
| 410 | phenylalanyl-tRNA synthetase subunit beta | |||
| 463 | Transposase and inactivated derivatives | |||
| 464 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo13821ORF464P |
| 465 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo13821ORF464P |
| 466 | secreted protein | |||
| 470 | uroporphyrinogen decarboxylase | |||
| 471 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13821ORF473P | |
| 472 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo13821ORF473P |
| 473 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13821ORF473P |
| 474 | Uncharacterised protein | |||
| 828 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 829 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13821ORF830P |
| 830 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo13821ORF830P |
| 831 | anthranilate synthase component I | |||
| 1088 | 3-isopropylmalate dehydratase small | |||
| 1089 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13821ORF1089P |
| 1090 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo13821ORF1089P |
| 1091 | 3-isopropylmalate dehydrogenase | |||
| 1938 | protein CysS | |||
| 1939 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13821ORF1940P |
| 1940 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo13821ORF1940P |
| 1941 | GTPase ObgE | |||
| 2046 | transcriptional accessory protein Tex | |||
| 2047 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo13821III |
| 2048 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo13821III |
| 2049 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo13821IIIP |
| 2050 | glutamate permease | |||
| 2154 | ribosome recycling factor | |||
| 2155 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo13821ORF2155P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo13821ORF2155P |
| 2158 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1121 | tRNA pseudouridine synthase B | |||
| 1122 | M | M.NgoG285II (100% identity) | GCAGA | M.Ngo13821ORF1122P |
| 1123 | R | NgoNCORF1272P (100% identity) | GCAGA | Ngo13821ORF1122P |
| 1124 | L-lactate dehydrogenase | |||
| 1215 | C32 tRNA thiolase | |||
| 1216 | R | NgoWPIIP (100% identity) | CCACC | Ngo13821IP |
| 1217 | M | M.NgoTFGA2ORF1109P (100% identity) | CCACC | M.Ngo13821I |
| 1218 | peptidyl-prolyl cis-trans isomerase A | |||