Neisseria gonorrhoeae NCTC13820 |
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Putative Neisseria gonorrhoeae NCTC13820 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,179,443 bp
GenBank #: UGRL00000000 (NZ_UGRL00000000)
REBASE acronym: Ngo13820
Org_num: 41565
All begin NCTC13820_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 474 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 475 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo13820ORF475P |
| 476 | DNA-damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (100% identity) | GCANNNNNNNGTC | S.Ngo13820ORF475P |
| 479 | R | NgoWSIIP (100% identity) | GCANNNNNNNGTC | Ngo13820ORF475P |
| 480 | ATP-dependent protease ATP-binding protein | |||
| 949 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 950 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo13820I |
| 951 | Uncharacterised protein | |||
| 952 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo13820I |
| 953 | DNA-binding protein | |||
| 954 | R | NgoWSIP (100% identity) | GAGNNNNNTAC | Ngo13820IP |
| 955 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo13820ORF7P |
| ??? | M | M.NgoWOORF8P (100% identity) | M.Ngo13820ORF7P | |
| 9 | Uncharacterised protein | |||
| 242 | type I restriction-modification system | |||
| 243 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo13820ORF243P |
| 244 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo13820ORF243P |
| 245 | excinuclease ABC subunit A | |||
| 368 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 369 | V | V.NgoWSORF391P (100% identity) | V.Ngo13820ORF370P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13820ORF370P | |
| 372 | R | NgoWSORF391P (100% identity) | Ngo13820ORF370P | |
| 373 | phenylalanyl-tRNA synthetase subunit beta | |||
| 426 | Transposase and inactivated derivatives | |||
| 427 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo13820ORF427P |
| 428 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo13820ORF427P |
| 429 | secreted protein | |||
| 433 | uroporphyrinogen decarboxylase | |||
| 434 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13820ORF436P | |
| 435 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo13820ORF436P |
| 436 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13820ORF436P |
| 437 | Uncharacterised protein | |||
| 787 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 788 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13820ORF789P |
| 789 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo13820ORF789P |
| 790 | anthranilate synthase component I | |||
| 977 | 3-isopropylmalate dehydratase small | |||
| 978 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13820ORF978P |
| 979 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo13820ORF978P |
| 980 | 3-isopropylmalate dehydrogenase | |||
| 1625 | phage replication initiation protein | |||
| 1626 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13820ORF1629P | |
| ??? | R | NgoWSORF1801P (100% identity) | Ngo13820ORF1629P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo13820ORF1629P | |
| 1630 | Uncharacterised protein | |||
| 1867 | protein CysS | |||
| 1868 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13820ORF1869P |
| 1869 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo13820ORF1869P |
| 1870 | GTPase ObgE | |||
| 1971 | transcriptional accessory protein Tex | |||
| 1972 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo13820IIP |
| 1973 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo13820II |
| 1974 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo13820IIP |
| 1975 | glutamate permease | |||
| 2077 | ribosome recycling factor | |||
| 2078 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo13820ORF2078P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo13820ORF2078P |
| 2081 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1009 | tRNA pseudouridine synthase B | |||
| ??? | M | M.NgoNG196ORF3575P (100% identity) | M.Ngo13820ORF1011P | |
| 1012 | R | NgoWSORF749P (100% identity) | Ngo13820ORF1011P | |
| 1013 | L-lactate dehydrogenase | |||
| 1105 | C32 tRNA thiolase | |||
| 1106 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo13820ORF1107P |
| 1107 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo13820ORF1107P |
| 1108 | peptidyl-prolyl cis-trans isomerase A | |||