Neisseria gonorrhoeae NCTC13818 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae NCTC13818 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,246,862 bp
GenBank #: UGRF00000000 (NZ_UGRF00000000)
REBASE acronym: Ngo13818
Org_num: 41564
All begin NCTC13818_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 273 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 274 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo13818ORF274P | |
| 275 | DNA-damage-inducible protein D | |||
| ??? | S | S.NgoTFGB2ORFAP (100% identity) | GACNNNNNNNTGC | S1.Ngo13818ORF274P |
| 277 | S | S2.NgoN160ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.Ngo13818ORF274P |
| 278 | R | NgoNCORF566P (100% identity) | Ngo13818ORF274P | |
| 279 | ATP-dependent protease ATP-binding protein | |||
| 821 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 822 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo13818I |
| 823 | Uncharacterised protein | |||
| 824 | Uncharacterised protein | |||
| 825 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo13818I |
| 826 | DNA-binding protein | |||
| 827 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo13818IP |
| 828 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | type I restriction-modification system | |||
| 46 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo13818ORF46P |
| 47 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo13818ORF46P |
| 48 | excinuclease ABC subunit A | |||
| 167 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 168 | V | V.NgoWSORF391P (100% identity) | V.Ngo13818ORF169P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13818ORF169P | |
| 171 | R | NgoWSORF391P (100% identity) | Ngo13818ORF169P | |
| 172 | phenylalanyl-tRNA synthetase subunit beta | |||
| 225 | Transposase and inactivated derivatives | |||
| 226 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo13818ORF226P |
| 227 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo13818ORF226P |
| 228 | secreted protein | |||
| 232 | uroporphyrinogen decarboxylase | |||
| 233 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13818ORF235P | |
| 234 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo13818ORF235P |
| 235 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13818ORF235P |
| 236 | Uncharacterised protein | |||
| 589 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 590 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13818ORF591P |
| 591 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo13818ORF591P |
| 592 | anthranilate synthase component I | |||
| 850 | 3-isopropylmalate dehydratase small | |||
| 851 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13818ORF851P |
| 852 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo13818ORF851P |
| 853 | 3-isopropylmalate dehydrogenase | |||
| 1474 | phage replication initiation protein | |||
| 1475 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13818ORF1478P | |
| ??? | R | Ngos1291ORF65P (100% identity) | Ngo13818ORF1478P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo13818ORF1478P | |
| 1479 | Uncharacterised protein | |||
| 1740 | protein CysS | |||
| 1741 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13818ORF1742P |
| 1742 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo13818ORF1742P |
| 1743 | GTPase ObgE | |||
| 1843 | transcriptional accessory protein Tex | |||
| 1844 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo13818III |
| 1845 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo13818III |
| 1846 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo13818IIIP |
| 1847 | Uncharacterised protein | |||
| 1949 | ribosome recycling factor | |||
| 1950 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo13818ORF1950P |
| ??? | R | NgoSW0236ORF9080P (100% identity) | GGCC | Ngo13818ORF1950P |
| 1953 | integral membrane protein | |||
| 2114 | leucyl-tRNA synthetase | |||
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo13818ORF2116P |
| ??? | M | M.NgoWPORF8P (100% identity) | M.Ngo13818ORF2116P | |
| 2117 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 883 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Ngo13800ORF1119P (100% identity) | GCAGA | M.Ngo13818II |
| 886 | R | NgoNCORF1272P (100% identity) | GCAGA | Ngo13818IIP |
| 887 | L-lactate dehydrogenase | |||
| 979 | C32 tRNA thiolase | |||
| 980 | R | NgoWPIIP (100% identity) | CCACC | Ngo13818ORF981P |
| 981 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo13818ORF981P |
| 982 | peptidyl-prolyl cis-trans isomerase A | |||