Neisseria gonorrhoeae NCTC13481 |
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Putative Neisseria gonorrhoeae NCTC13481 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,264,172 bp
GenBank #: UGRH00000000 (NZ_UGRH00000000)
REBASE acronym: Ngo13481
Org_num: 41563
All begin NCTC13481_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 658 | recombination factor protein RarA | |||
| 659 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo13481IIP |
| 660 | DNA-binding protein | |||
| 661 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo13481II |
| 662 | Uncharacterised protein | |||
| 663 | Uncharacterised protein | |||
| 664 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo13481II |
| 665 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 1136 | ATP-dependent protease ATP-binding protein | |||
| 1137 | R | NgoWSIIP (100% identity) | GCANNNNNNGTC | Ngo13481IIIP |
| 1138 | S | S.NgoWMII (100% identity) | GCANNNNNNGTC | S1.Ngo13481IIIP |
| 1139 | DNA-damage-inducible protein D | |||
| 1140 | M | M.NgoWSII (100% identity) | GCANNNNNNGTC | M.Ngo13481III |
| 1141 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 632 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo13481ORF635P |
| 635 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13481ORF635P |
| 636 | 3-isopropylmalate dehydratase small | |||
| 826 | anthranilate synthase component I | |||
| 827 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo13481ORF827P |
| 828 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13481ORF827P |
| 829 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 1178 | Uncharacterised protein | |||
| 1179 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13481ORF1179P |
| 1180 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo13481ORF1179P |
| 1181 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13481ORF1179P | |
| 1182 | uroporphyrinogen decarboxylase | |||
| 1186 | secreted protein | |||
| 1187 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo13481ORF1188P |
| 1188 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo13481ORF1188P |
| 1189 | Transposase and inactivated derivatives | |||
| 1242 | phenylalanyl-tRNA synthetase subunit beta | |||
| 1243 | R | Npo18661ORFHP (100% identity) | Ngo13481ORF1244P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13481ORF1244P | |
| 1246 | V | V.NgoWSORF391P (100% identity) | V.Ngo13481ORF1244P | |
| 1247 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 1371 | excinuclease ABC subunit A | |||
| 1372 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo13481ORF1373P |
| 1373 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo13481ORF1373P |
| 1374 | type I restriction-modification system | |||
| 1600 | Uncharacterised protein | |||
| ??? | M | M.NgoWPORF8P (93% identity) | M.Ngo13481ORF1601P | |
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo13481ORF1601P |
| 1603 | leucyl-tRNA synthetase | |||
| 1763 | integral membrane protein | |||
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo13481ORF1766P |
| 1766 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo13481ORF1766P |
| 1767 | ribosome recycling factor | |||
| 1870 | glutamate permease | |||
| 1871 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo13481IVP |
| 1872 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo13481IV |
| 1873 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo13481IV |
| 1874 | transcriptional accessory protein Tex | |||
| 1974 | GTPase ObgE | |||
| 1975 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo13481ORF1975P |
| 1976 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13481ORF1975P |
| 1977 | protein CysS | |||
| 2215 | Uncharacterised protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo13481ORF2216P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | CCGG | Ngo13481ORF2216P |
| 2219 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13481ORF2216P | |
| 2220 | phage replication initiation protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 504 | peptidyl-prolyl cis-trans isomerase A | |||
| 505 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo13481ORF505P |
| 506 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo13481ORF505P |
| 507 | C32 tRNA thiolase | |||
| 599 | L-lactate dehydrogenase | |||
| 600 | R | Ngos1291ORF8930P (100% identity) | GCAGA | Ngo13481IP |
| 601 | M | M.NgoFC428ORF645P (99% identity) | GCAGA | M.Ngo13481I |
| 602 | tRNA pseudouridine synthase B | |||