Neisseria gonorrhoeae NCTC13479 |
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Putative Neisseria gonorrhoeae NCTC13479 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,174,050 bp
GenBank #: UGRG00000000 (NZ_UGRG00000000)
REBASE acronym: Ngo13479
Org_num: 41562
All begin NCTC13479_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 470 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 471 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.Ngo13479ORF471P |
| 472 | DNA-damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (100% identity) | GCANNNNNNNGTC | S.Ngo13479ORF471P |
| 475 | R | NgoWSIIP (100% identity) | GCANNNNNNNGTC | Ngo13479ORF471P |
| 476 | ATP-dependent protease ATP-binding protein | |||
| 762 | recombination factor protein RarA | |||
| 763 | R | NgoWSIP (100% identity) | GAGNNNNNTAC | Ngo13479IIP |
| 764 | DNA-binding protein | |||
| 765 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo13479II |
| 766 | Uncharacterised protein | |||
| 767 | Uncharacterised protein | |||
| 768 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo13479II |
| 769 | bifunctional 3,4-dihydroxy-2-butanone | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo13479ORF7P |
| ??? | M | M.NgoWOORF8P (100% identity) | M.Ngo13479ORF7P | |
| 9 | Uncharacterised protein | |||
| 238 | type I restriction-modification system | |||
| 239 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo13479ORF239P |
| 240 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo13479ORF239P |
| 241 | excinuclease ABC subunit A | |||
| 364 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 365 | V | V.NgoWSORF391P (100% identity) | V.Ngo13479ORF366P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13479ORF366P | |
| 368 | R | NgoWSORF391P (100% identity) | Ngo13479ORF366P | |
| 369 | phenylalanyl-tRNA synthetase subunit beta | |||
| 422 | Transposase and inactivated derivatives | |||
| 423 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo13479ORF423P |
| 424 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo13479ORF423P |
| 425 | secreted protein | |||
| 429 | uroporphyrinogen decarboxylase | |||
| 430 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13479ORF432P | |
| 431 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo13479ORF432P |
| 432 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13479ORF432P |
| 433 | Uncharacterised protein | |||
| 739 | 3-isopropylmalate dehydrogenase | |||
| 740 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo13479ORF741P |
| 741 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13479ORF741P |
| 742 | 3-isopropylmalate dehydratase small | |||
| 928 | anthranilate synthase component I | |||
| 929 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo13479ORF929P |
| 930 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13479ORF929P |
| 931 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 1622 | phage replication initiation protein | |||
| 1623 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13479ORF1626P | |
| ??? | R | NgoWSORF1801P (100% identity) | Ngo13479ORF1626P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo13479ORF1626P | |
| 1627 | Uncharacterised protein | |||
| 1866 | protein CysS | |||
| 1867 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13479ORF1868P |
| 1868 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo13479ORF1868P |
| 1869 | GTPase ObgE | |||
| 1968 | transcriptional accessory protein Tex | |||
| 1969 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo13479III |
| 1970 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo13479III |
| 1971 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo13479IIIP |
| 1972 | glutamate permease | |||
| 2074 | ribosome recycling factor | |||
| 2075 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo13479ORF2075P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo13479ORF2075P |
| 2078 | integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 611 | peptidyl-prolyl cis-trans isomerase A | |||
| 612 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo13479ORF612P |
| 613 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo13479ORF612P |
| 614 | C32 tRNA thiolase | |||
| 706 | L-lactate dehydrogenase | |||
| 707 | R | NgoWSORF749P (100% identity) | GCAGA | Ngo13479IP |
| 708 | M | M.NgoSW0018ORF3235P (98% identity) | GCAGA | M.Ngo13479I |
| 709 | tRNA pseudouridine synthase B | |||