Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 2,174,050 bp

GenBank #: UGRG00000000 (NZ_UGRG00000000)

REBASE acronym: Ngo13479

Org_num: 41562

 

All begin NCTC13479_

Type I
ORF Gene Most similar Specificity Name
 
470 ADP-L-glycero-D-manno-heptose-6-epimerase
471 M M.Ngos1291ORF7750P (100% identity) GCANNNNNNNGTC M.Ngo13479ORF471P
472 DNA-damage-inducible protein D
??? S S.NgoJH16ORFHP (100% identity) GCANNNNNNNGTC S.Ngo13479ORF471P
475 R NgoWSIIP (100% identity) GCANNNNNNNGTC Ngo13479ORF471P
476 ATP-dependent protease ATP-binding protein
 
762 recombination factor protein RarA
763 R NgoWSIP (100% identity) GAGNNNNNTAC Ngo13479ORF768P
764 DNA-binding protein
765 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo13479ORF768P
766 Uncharacterised protein
767 Uncharacterised protein
768 M M.NgoWSI (100% identity) GAGNNNNNTAC M.Ngo13479ORF768P
769 bifunctional 3,4-dihydroxy-2-butanone
Type II
ORF Gene Most similar Specificity Name
 
6 leucyl-tRNA synthetase
??? R NgoWGORF7P (100% identity) GATC Ngo13479ORF7P
??? M M.NgoWOORF8P (100% identity) M.Ngo13479ORF7P
9 Uncharacterised protein
 
238 type I restriction-modification system
239 M M.NgoWSORF259P (100% identity) CCGCGG M.Ngo13479ORF239P
240 R NgoWSORF259P (100% identity) CCGCGG Ngo13479ORF239P
241 excinuclease ABC subunit A
 
364 phenylalanyl-tRNA synthetase subunit alpha
365 V V.NgoWSORF391P (100% identity) V.Ngo13479ORF366P
??? M M.NgoWSORF391P (100% identity) M.Ngo13479ORF366P
368 R NgoWSORF391P (100% identity) Ngo13479ORF366P
369 phenylalanyl-tRNA synthetase subunit beta
 
422 Transposase and inactivated derivatives
423 RM NgoWSORF450P (100% identity) GACNNNNNTGA Ngo13479ORF423P
424 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo13479ORF423P
425 secreted protein
 
429 uroporphyrinogen decarboxylase
430 H H.NgoWSORF459P (100% identity) H.Ngo13479ORF432P
431 R NgoWSORF459P (100% identity) GCSGC Ngo13479ORF432P
432 M M.NgoWSORF459P (100% identity) GCSGC M.Ngo13479ORF432P
433 Uncharacterised protein
 
739 3-isopropylmalate dehydrogenase
740 R NgoWSORF784P (100% identity) GGNNCC Ngo13479ORF741P
741 M M.NmeM395ORFKP (100% identity) GGNNCC M.Ngo13479ORF741P
742 3-isopropylmalate dehydratase small
 
928 anthranilate synthase component I
929 M M.NgoWSORF1056P (100% identity) GCCGGC M.Ngo13479ORF929P
930 R NgoWSORF1056P (100% identity) GCCGGC Ngo13479ORF929P
931 phosphoribosylaminoimidazole carboxylase ATPase
 
1622 phage replication initiation protein
1623 V V.NgoWSORF1801P (100% identity) V.Ngo13479ORF1626P
??? R NgoWSORF1801P (100% identity) Ngo13479ORF1626P
??? M M.Ngos1291ORF65P (100% identity) M.Ngo13479ORF1626P
1627 Uncharacterised protein
 
1866 protein CysS
1867 R NgoWSORF2052P (100% identity) RGCGCY Ngo13479ORF1868P
1868 M M.NgoWSORF2052P (100% identity) RGCGCY M.Ngo13479ORF1868P
1869 GTPase ObgE
 
1968 transcriptional accessory protein Tex
1969 M M1.NgoWSIII (100% identity) GGTGA M1.Ngo13479ORF1969P
1970 M M2.NgoWSIII (100% identity) GGTGA M2.Ngo13479ORF1969P
1971 R NgoWSIIIP (100% identity) GGTGA Ngo13479ORF1969P
1972 glutamate permease
 
2074 ribosome recycling factor
2075 M M.NgoWSORF2276P (100% identity) GGCC M.Ngo13479ORF2075P
??? R NgoWSORF2276P (100% identity) GGCC Ngo13479ORF2075P
2078 integral membrane protein
Type III
ORF Gene Most similar Specificity Name
 
611 peptidyl-prolyl cis-trans isomerase A
612 M M.NgoWSORF647P (100% identity) CCACC M.Ngo13479ORF612P
613 R NgoWSORF647P (100% identity) CCACC Ngo13479ORF612P
614 C32 tRNA thiolase
 
706 L-lactate dehydrogenase
707 R NgoWSORF749P (100% identity) GCAGA Ngo13479IP
708 M M.NgoSW0018ORF3235P (98% identity) GCAGA M.Ngo13479I
709 tRNA pseudouridine synthase B