Ref: Doyle,S. unpublished

REBASE ref # 22501

Contig set: 2,314,363 bp

GenBank #: UGRC00000000 (NZ_UGRC00000000)

REBASE acronym: Ngo13477

Org_num: 41561

 

All begin NCTC13477_

Type I
ORF Gene Most similar Specificity Name
 
1735 ADP-L-glycero-D-manno-heptose-6-epimerase
1736 M M.Ngos1291ORF7750P (100% identity) M.Ngo13477ORF1736P
1737 DNA-damage-inducible protein D
1738 S S1.NgoWOORF429P (100% identity) GCANNNNNNNNTGC S1.Ngo13477ORF1736P
1739 S S2.NgoWSII (100% identity) GCANNNNNNNNTGC S2.Ngo13477ORF1736P
??? R NgoWFORF430P (100% identity) Ngo13477ORF1736P
1742 ATP-dependent protease ATP-binding protein
 
2031 recombination factor protein RarA
??? R NgoWFORF746P (100% identity) GAGNNNNNTAC Ngo13477ORF2038P
2034 DNA-binding protein
2035 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo13477ORF2038P
2036 Uncharacterised protein
2037 Uncharacterised protein
??? M M.NgoWFORF746P (100% identity) GAGNNNNNTAC M.Ngo13477ORF2038P
2040 bifunctional 3,4-dihydroxy-2-butanone
Type II
ORF Gene Most similar Specificity Name
 
207 phage replication initiation protein
208 V V.NgoWSORF1801P (100% identity) V.Ngo13477ORF211P
??? R NgoWSORF1801P (100% identity) Ngo13477ORF211P
??? M M.Ngos1291ORF65P (100% identity) M.Ngo13477ORF211P
212 Uncharacterised protein
 
900 integral membrane protein
??? R NgoWFORF2088P (100% identity) GGCC Ngo13477ORF903P
903 M M.NgoWSORF2276P (100% identity) GGCC M.Ngo13477ORF903P
904 ribosome recycling factor
 
1001 glutamate permease
??? R NgoWFIIP (100% identity) GGTGA Ngo13477IIP
1004 M M1.Ngos1291II (100% identity) GGTGA M1.Ngo13477II
1005 M 5-methylcytosine methyltransferase GGTGA M2.Ngo13477IIP
1006 transcriptional accessory protein Tex
 
1112 GTPase ObgE
1113 M M.NgoWFORF2310P (100% identity) RGCGCY M.Ngo13477ORF1113P
1114 R NgoWSORF2052P (100% identity) RGCGCY Ngo13477ORF1113P
1115 protein CysS
 
1335 leucyl-tRNA synthetase
??? R NgoWGORF7P (100% identity) GATC Ngo13477ORF1336P
??? M M.NgoWOORF8P (100% identity) M.Ngo13477ORF1336P
1338 Uncharacterised protein
 
1628 phenylalanyl-tRNA synthetase subunit alpha
1629 V V.NgoWSORF391P (100% identity) V.Ngo13477ORF1630P
??? M M.NgoWSORF391P (100% identity) M.Ngo13477ORF1630P
1632 R NgoWSORF391P (100% identity) Ngo13477ORF1630P
1633 phenylalanyl-tRNA synthetase subunit beta
 
1686 Transposase and inactivated derivatives
1687 RM NgoWOORF381P (100% identity) GACNNNNNTGA Ngo13477ORF1687P
1688 S S.NgoWFORF381P (100% identity) GACNNNNNTGA S.Ngo13477ORF1687P
1689 secreted protein
 
1693 uroporphyrinogen decarboxylase
1694 H H.NgoWSORF459P (100% identity) H.Ngo13477ORF1696P
1695 R NgoWFORF390P (100% identity) GCSGC Ngo13477ORF1696P
1696 M M.NgoWSORF459P (100% identity) GCSGC M.Ngo13477ORF1696P
1697 Uncharacterised protein
 
2006 3-isopropylmalate dehydrogenase
2007 R NgoWSORF784P (100% identity) GGNNCC Ngo13477ORF2008P
2008 M M.NmeM395ORFKP (100% identity) GGNNCC M.Ngo13477ORF2008P
2009 3-isopropylmalate dehydratase small
 
2271 anthranilate synthase component I
2272 M M.NgoWLORF1156P (100% identity) GCCGGC M.Ngo13477ORF2272P
2273 R NgoWSORF1056P (100% identity) GCCGGC Ngo13477ORF2272P
2274 phosphoribosylaminoimidazole carboxylase ATPase
Type III
ORF Gene Most similar Specificity Name
 
1878 peptidyl-prolyl cis-trans isomerase A
1879 M M.NgoWFI (100% identity) CCACC M.Ngo13477I
1880 R NgoWSORF647P (100% identity) CCACC Ngo13477IP
1881 C32 tRNA thiolase
 
1972 L-lactate dehydrogenase
1973 R NgoWFORF680P (100% identity) Ngo13477ORF1974P
??? M M.NgoNG196ORF3575P (99% identity) M.Ngo13477ORF1974P
1976 tRNA pseudouridine synthase B