Neisseria gonorrhoeae NCTC13477 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae NCTC13477 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,314,363 bp
GenBank #: UGRC00000000 (NZ_UGRC00000000)
REBASE acronym: Ngo13477
Org_num: 41561
All begin NCTC13477_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1735 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 1736 | M | M.Ngos1291ORF7750P (100% identity) | M.Ngo13477ORF1736P | |
| 1737 | DNA-damage-inducible protein D | |||
| 1738 | S | S1.NgoWOORF429P (100% identity) | GCANNNNNNNNTGC | S1.Ngo13477ORF1736P |
| 1739 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo13477ORF1736P |
| ??? | R | NgoWFORF430P (100% identity) | Ngo13477ORF1736P | |
| 1742 | ATP-dependent protease ATP-binding protein | |||
| 2031 | recombination factor protein RarA | |||
| ??? | R | NgoWFORF746P (100% identity) | GAGNNNNNTAC | Ngo13477ORF2038P |
| 2034 | DNA-binding protein | |||
| 2035 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo13477ORF2038P |
| 2036 | Uncharacterised protein | |||
| 2037 | Uncharacterised protein | |||
| ??? | M | M.NgoWFORF746P (100% identity) | GAGNNNNNTAC | M.Ngo13477ORF2038P |
| 2040 | bifunctional 3,4-dihydroxy-2-butanone | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 207 | phage replication initiation protein | |||
| 208 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13477ORF211P | |
| ??? | R | NgoWSORF1801P (100% identity) | Ngo13477ORF211P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo13477ORF211P | |
| 212 | Uncharacterised protein | |||
| 900 | integral membrane protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo13477ORF903P |
| 903 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo13477ORF903P |
| 904 | ribosome recycling factor | |||
| 1001 | glutamate permease | |||
| ??? | R | NgoWFIIP (100% identity) | GGTGA | Ngo13477IIP |
| 1004 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo13477II |
| 1005 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.Ngo13477IIP |
| 1006 | transcriptional accessory protein Tex | |||
| 1112 | GTPase ObgE | |||
| 1113 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.Ngo13477ORF1113P |
| 1114 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13477ORF1113P |
| 1115 | protein CysS | |||
| 1335 | leucyl-tRNA synthetase | |||
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo13477ORF1336P |
| ??? | M | M.NgoWOORF8P (100% identity) | M.Ngo13477ORF1336P | |
| 1338 | Uncharacterised protein | |||
| 1628 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 1629 | V | V.NgoWSORF391P (100% identity) | V.Ngo13477ORF1630P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13477ORF1630P | |
| 1632 | R | NgoWSORF391P (100% identity) | Ngo13477ORF1630P | |
| 1633 | phenylalanyl-tRNA synthetase subunit beta | |||
| 1686 | Transposase and inactivated derivatives | |||
| 1687 | RM | NgoWOORF381P (100% identity) | GACNNNNNTGA | Ngo13477ORF1687P |
| 1688 | S | S.NgoWFORF381P (100% identity) | GACNNNNNTGA | S.Ngo13477ORF1687P |
| 1689 | secreted protein | |||
| 1693 | uroporphyrinogen decarboxylase | |||
| 1694 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13477ORF1696P | |
| 1695 | R | NgoWFORF390P (100% identity) | GCSGC | Ngo13477ORF1696P |
| 1696 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13477ORF1696P |
| 1697 | Uncharacterised protein | |||
| 2006 | 3-isopropylmalate dehydrogenase | |||
| 2007 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo13477ORF2008P |
| 2008 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13477ORF2008P |
| 2009 | 3-isopropylmalate dehydratase small | |||
| 2271 | anthranilate synthase component I | |||
| 2272 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo13477ORF2272P |
| 2273 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13477ORF2272P |
| 2274 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1878 | peptidyl-prolyl cis-trans isomerase A | |||
| 1879 | M | M.NgoWFI (100% identity) | CCACC | M.Ngo13477I |
| 1880 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo13477IP |
| 1881 | C32 tRNA thiolase | |||
| 1972 | L-lactate dehydrogenase | |||
| 1973 | R | NgoWFORF680P (100% identity) | Ngo13477ORF1974P | |
| ??? | M | M.NgoNG196ORF3575P (99% identity) | M.Ngo13477ORF1974P | |
| 1976 | tRNA pseudouridine synthase B | |||