Neisseria flavescens NCTC8263 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria flavescens NCTC8263 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,291,788 bp
GenBank #: UGQV00000000 (NZ_UGQV00000000)
REBASE acronym: Nfl8263
Org_num: 41559
All begin NCTC8263_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1078 | molybdopterin-guanine dinucleotide | |||
| 1079 | R | Nme9390IVP (100% identity) | CRTANNNNNNRTTT | Nfl8263IVP |
| ??? | S | S.Nme9390IV (100% identity) | CRTANNNNNNRTTT | S.Nfl8263IV |
| 1081 | M | M.Nme9390IV (100% identity) | CRTANNNNNNRTTT | M.Nfl8263IV |
| 1082 | NadB protein | |||
| 1913 | thioredoxin | |||
| 1914 | R | NflHORF1839P (100% identity) | ACGNNNNNNRTGG | Nfl8263IIP |
| 1915 | S | S.Nme9390II (100% identity) | ACGNNNNNNRTGG | S.Nfl8263II |
| 1916 | DNA-binding protein | |||
| 1917 | M | M.Nme9390II (100% identity) | ACGNNNNNNRTGG | M.Nfl8263II |
| 1918 | ABC transporter ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 682 | DNA topoisomerase IV subunit B | |||
| 683 | R | Nme9390ORF1687P (100% identity) | CCGG | Nfl8263ORF684P |
| 684 | M | M.Nme9390ORF1687P (100% identity) | CCGG | M.Nfl8263ORF684P |
| 685 | V | V.Nme9390ORF1687P (100% identity) | V.Nfl8263ORF684P | |
| 686 | dinucleoside polyphosphate hydrolase | |||
| 756 | DNA repair protein RadA | |||
| 757 | M | M.Nme9390ORF1612P (100% identity) | M.Nfl8263ORF757P | |
| 758 | R | Nme9390ORF1612P (100% identity) | Nfl8263ORF757P | |
| 759 | H | H.Nme9390ORF1612P (100% identity) | H.Nfl8263ORF757P | |
| 760 | carboxy-terminal processing protease | |||
| 1020 | Virus attachment protein p12 family | |||
| 1021 | RM | Nme9390I (100% identity) | GCGGAG | Nfl8263I |
| 1022 | UDP-N-acetylmuramate: | |||
| 1139 | 3-isopropylmalate dehydratase small | |||
| 1140 | M | M.Npo43768ORF501P (100% identity) | GGNNCC | M.Nfl8263ORF1140P |
| 1141 | R | Nme9390ORF727P (100% identity) | GGNNCC | Nfl8263ORF1140P |
| 1142 | 3-isopropylmalate dehydrogenase | |||
| 1155 | pseudouridine synthase | |||
| 1156 | RM | Nme9390ORF711P (100% identity) | CGANNNNNNTGC | Nfl8263ORF1156P |
| 1157 | S | S.NflHORF1491P (100% identity) | S.Nfl8263ORF1156P | |
| 1158 | FMN oxidoreductase CC3083 | |||
| 1260 | alanyl-tRNA synthetase | |||
| 1261 | R | Nme9390ORF605P (100% identity) | GCGCGC | Nfl8263ORF1262P |
| 1262 | M | M.NflHORF697P (98% identity) | GCGCGC | M.Nfl8263ORF1262P |
| 1263 | tellurite resistance protein TehA | |||
| 1667 | leucyl-tRNA synthetase | |||
| 1668 | M | M1.Nme9390III (99% identity) | GATC | M1.Nfl8263III |
| 1669 | M | M2.Nme9390III (100% identity) | GATC | M2.Nfl8263III |
| 1670 | Methyl-directed mismatch repair protein | |||
| 1671 | C | C.Nme9390IIIP (100% identity) | C.Nfl8263IIIP | |
| 1672 | integrase | |||
| 2106 | ATP-dependent DNA helicase | |||
| 2107 | R | Nme9390VP (100% identity) | GATATC | Nfl8263VP |
| 2108 | M | M.Nme9390V (100% identity) | GATATC | M.Nfl8263V |
| 2109 | DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1763 | Uncharacterised protein | |||
| 1764 | R | Nme9390ORF2125P (100% identity) | Nfl8263ORF1765P | |
| 1765 | M | M.Nme9390ORF2125P (100% identity) | M.Nfl8263ORF1765P | |
| 1766 | prolyl endopeptidase | |||