Chryseobacterium species NEB161 |
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Putative Chryseobacterium species NEB161 RM systems
Ref: Fomenkov,A. et al. unpublished
REBASE ref # 30163
Complete sequence: 3,543,981 bp
GenBank #: CP050993
REBASE acronym: Acc
Org_num: 83
All begin HER18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2020 | AAA domain-containing protein | |||
| 2025 | S | S.Fba3330ORF8655P (36% identity) | S1.AccVIP | |
| 2030 | tyrosine-type recombinase/integrase | |||
| 2035 | S | S2.Cca9942ORF17250P (62% identity) | CAGNNNNNTGA | S2.AccVI |
| 2040 | S | S2.Cha79ORF6620P (64% identity) | S3.AccVIP | |
| 2045 | M | M.Csp162ORF16825P (99% identity) | CAGNNNNNTGA | M.AccVI |
| 2050 | R | Csp162ORF16825P (99% identity) | CAGNNNNNTGA | AccVIP |
| 2055 | 190 aa hypothetical protein | |||
| 3540 | virulence-associated E family protein | |||
| 3545 | M | M.ModG13ORF17935P (94% identity) | GGYANNNNNNTTC | M.AccVII |
| 3550 | ORF6N domain-containing protein | |||
| 3555 | DNA-binding protein | |||
| 3560 | S | S.Ade25694ORF1074P (46% identity) | GGYANNNNNNTTC | S.AccVII |
| 3565 | killer suppression protein HigA | |||
| 3570 | HigA family addiction module antidote protein | |||
| 3575 | R | ModG13ORF17935P (96% identity) | GGYANNNNNNTTC | AccVIIP |
| 3580 | Fic family protein | |||
| 5135 | 206 aa hypothetical protein | |||
| 5140 | R | Csp5649ORF8590P (97% identity) | ATGNNNNNTAC | AccIVP |
| 5145 | 200 aa hypothetical protein | |||
| 5150 | S | S.Fsp1321ORF21970P (56% identity) | ATGNNNNNTAC | S.AccIV |
| 5155 | M | M.CspADR1ORF9525P (97% identity) | ATGNNNNNTAC | M.AccIV |
| 5160 | GIY-YIG nuclease family protein | |||
| 7725 | master DNA invertase Mpi family serine-type | |||
| 7730 | S | S.Csp274ORF211P (31% identity) | S1.AccVP | |
| 7735 | S | S1.Psp4590ORF5095P (31% identity) | GGAANNNNNNRTC | S2.AccV |
| 7740 | M | M.PspL3A8ORFDP (73% identity) | GGAANNNNNNRTC | M.AccV |
| 7745 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 845 | helix-turn-helix domain-containing protein | |||
| 850 | M | M.Csp5649ORF11625P (92% identity) | TCCGGA | M.AccIII |
| 855 | R | Csp5649ORF11625P (93% identity) | TCCGGA | AccIII |
| 860 | excinuclease ABC subunit UvrA | |||
| 935 | 225 aa hypothetical protein | |||
| 940 | RM | Csp5649ORF11535P (87% identity) | GGARCA | AccX |
| 945 | 266 aa hypothetical protein | |||
| 2740 | 207 aa hypothetical protein | |||
| 2745 | M | M.Emi79826ORF210P (43% identity) | GATC | M.AccXI |
| 2750 | DNA methylase N-4 | |||
| 2745 | DNA (cytosine-5-)-methyltransferase | |||
| 2750 | M | M.CspH4486ORF6435P (78% identity) | M.AccORF2750P | |
| 2755 | helix-turn-helix domain-containing protein | |||
| 9235 | 407 aa hypothetical protein | |||
| 9240 | RM | MaeM03ORF9345P (59% identity) | GACRAC | AccIX |
| 9245 | 114 aa hypothetical protein | |||
| 10945 | tyrosine-type recombinase/integrase | |||
| 10950 | R | Fsp1846ORFGP (95% identity) | GTMKAC | AccI |
| 10955 | M | M.Fsp1846ORFGP (94% identity) | GTMKAC | M.AccI |
| 10960 | transposase | |||
| 14850 | 636 aa hypothetical protein | |||
| 14855 | M | M.Cbo19482ORF1733P (99% identity) | CTGAAG | M.AccVIII |
| 14860 | RM | Cbo19482ORF1732P (99% identity) | CTGAAG | AccVIII |
| 14865 | C | C.EmiN11ORF14695P (99% identity) | C.AccVIIIP | |
| 14870 | 402 aa hypothetical protein | |||
| 15610 | 98 aa hypothetical protein | |||
| 15615 | C | C.Fsp3904ORFBP (93% identity) | C.AccIIP | |
| 15620 | M | M.Cna41ORF18020P (90% identity) | CGCG | M.AccII |
| 15625 | R | CbaRWORF1096P (93% identity) | CGCG | AccII |
| 15630 | 223 aa hypothetical protein | |||
| 15705 | NERD domain-containing protein | |||
| 15710 | M | M.Csp2069ORF5745P (100% identity) | M.AccORF15710P | |
| 15715 | DUF1016 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12775 | M14 family metallopeptidase | |||
| 12780 | R | Csp5649McrCP (99% identity) | AccMcrCP | |
| 12785 | R | Csp5649McrBP (52% identity) | AccMcrBP | |
| 12790 | elongation factor 4 | |||