Moraxella catarrhalis NCTC4103 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Moraxella catarrhalis NCTC4103 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,205,920 bp
GenBank #: UGPV00000000 (NZ_UGPV00000000)
REBASE acronym: Mca4103
Org_num: 41531
All begin NCTC4103_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 43 | helicase Cas3 | |||
| 44 | M | M.McaZORF364P (98% identity) | RAACNNNNNNTGT | M.Mca4103I |
| 45 | S | S.Mca353ORF290P (65% identity) | RAACNNNNNNTGT | S.Mca4103I |
| 46 | Predicted transcriptional regulator | |||
| 47 | Uncharacterised protein | |||
| 48 | R | McaZORF364P (97% identity) | RAACNNNNNNTGT | Mca4103IP |
| 49 | Protein of uncharacterised function DUF45 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8 | Uncharacterised protein | |||
| 9 | M | M.Hin7858ORF4435P (96% identity) | GCATC | M.Mca4103II |
| 10 | R | Pba12565ORF8745P (96% identity) | GCATC | Mca4103IIP |
| 11 | chromosome segregation protein | |||
| 539 | Valine--tRNA ligase | |||
| 540 | M | M2.McaS11ORF127P (86% identity) | M1.Mca4103ORF540P | |
| 541 | Dam-replacing family | |||
| 542 | Uncharacterised protein | |||
| 543 | M | M.Mov9955ORF2720BP (78% identity) | M2.Mca4103ORF540P | |
| 544 | Acetoin utilization protein AcuC | |||
| 540 | DNA adenine methylase | |||
| 541 | R | Mov11969ORF1694P (100% identity) | Mca4103ORF541P | |
| 542 | Uncharacterised protein | |||
| 1561 | Low specificity L-threonine aldolase | |||
| 1562 | RM | McaMC6ORF850P (94% identity) | Mca4103ORF1564P | |
| 1563 | M | M2.McaS11ORF1774P (90% identity) | M2.Mca4103ORF1564P | |
| 1564 | M | M1.Mca50B1ORF1846P (86% identity) | M1.Mca4103ORF1564P | |
| 1565 | Threonine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 358 | Diaminobutyrate--2-oxoglutarate | |||
| 359 | M | M.Mca23246IP (81% identity) | M.Mca4103ORF359P | |
| 360 | R | McaA9ORF1961P (96% identity) | Mca4103ORF359P | |
| 361 | L-2,4-diaminobutyrate decarboxylase | |||
| 602 | Aspartokinase 2 | |||
| 603 | R | McaZORF57P (99% identity) | Mca4103ORF604P | |
| ??? | M | M.Mca23246IIP (88% identity) | M.Mca4103ORF604P | |
| 606 | Alanine--tRNA ligase | |||
| 814 | RNA polymerase-associated protein rapA | |||
| 815 | R | Mca2ORF9160P (94% identity) | Mca4103ORF816P | |
| ??? | M | M.Gan200ORF6640AP (23% identity) | M.Mca4103ORF816P | |
| 818 | Uncharacterised protein | |||
| 2012 | Cysteine synthase | |||
| 2013 | R | Mca3622ORF1698P (99% identity) | Mca4103ORF2014P | |
| 2014 | M | M.McaS11ORF1233P (65% identity) | M.Mca4103ORF2014P | |
| 2015 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1299 | Predicted acetyltransferase | |||
| 1300 | R | McaZI (99% identity) | Mca4103ORF1300P | |
| 1301 | Uncharacterized conserved protein | |||
| 1379 | Queuine tRNA-ribosyltransferase | |||
| ??? | R | McaZMcrCP (95% identity) | Mca4103McrCP | |
| 1382 | transposase, IS605 OrfB family | |||
| ??? | R | McaZMcrBP (40% identity) | Mca4103McrBP | |
| 1386 | reductase | |||