Lactobacillus gasseri NCTC13722 |
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Putative Lactobacillus gasseri NCTC13722 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,899,682 bp
GenBank #: UGNT00000000 (NZ_UGNT00000000)
REBASE acronym: Lga13722
Org_num: 39582
All begin NCTC13722_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1921 | R | Lga13722ORF899P (67% identity) | Lga13722ORF7P | |
| 1922 | S | S2.Lga1266ORF3855P (100% identity) | S2.Lga13722ORF7P | |
| 1923 | integrase | |||
| 1924 | S | S2.Lga13722ORF899P (54% identity) | S1.Lga13722ORF7P | |
| 1925 | M | M.LgrVSI07ORF3855P (100% identity) | M.Lga13722ORF7P | |
| 1926 | Uncharacterised protein | |||
| 2 | PF03235 family protein | |||
| 3 | R | Lga13722ORF899P (67% identity) | Lga13722ORF7P | |
| 4 | S | S2.Lga1266ORF3855P (100% identity) | S2.Lga13722ORF7P | |
| 5 | integrase | |||
| 6 | S | S2.Lga13722ORF899P (54% identity) | S1.Lga13722ORF7P | |
| 7 | M | M.LgrVSI07ORF3855P (100% identity) | M.Lga13722ORF7P | |
| 8 | Uncharacterised protein | |||
| 898 | Uncharacterised protein | |||
| ??? | M | M.LgrVSI07ORF3855P (97% identity) | M.Lga13722ORF899P | |
| 901 | S | S1.LgrVSI07ORF3855P (100% identity) | S1.Lga13722ORF899P | |
| 902 | integrase | |||
| 903 | S | S2.LgrVSI07ORF3855P (93% identity) | S2.Lga13722ORF899P | |
| 904 | integrase | |||
| 905 | S | S1.LgrVSI07ORF3855P (93% identity) | S3.Lga13722ORF899P | |
| 906 | R | LgrVSI07ORF3855P (99% identity) | Lga13722ORF899P | |
| 907 | PF03235 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1493 | Phage terminase, small subunit | |||
| 1494 | M | M.LgaVSI26ORF7025P (100% identity) | M.Lga13722ORF1494P | |
| 1495 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1474 | Uncharacterised protein | |||
| 1475 | R | LgaVSI26ORF6925P (100% identity) | Lga13722ORF1476P | |
| ??? | M | M.LgaORF1464P (100% identity) | M.Lga13722ORF1476P | |
| 1478 | C | C.LgaVSI26ORF6925P (100% identity) | C.Lga13722ORF1476P | |
| 1479 | ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 78 | exonuclease III | |||
| 79 | R | LgaHL20ORF36P (100% identity) | Lga13722ORF79P | |
| 80 | alpha/beta hydrolase superfamily protein | |||