Klebsiella pneumoniae NCTC8883 |
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Putative Klebsiella pneumoniae NCTC8883 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,484,860 bp
GenBank #: UGLD00000000 (NZ_UGLD00000000)
REBASE acronym: Kpn8883
Org_num: 39423
All begin NCTC8883_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2105 | transposase | |||
| 2106 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Kpn8883III |
| 2107 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Kpn8883III |
| 2108 | SMC domain-containing protein | |||
| 4790 | Xylose isomerase | |||
| ??? | S | S.Kpn13700ORF971P (100% identity) | S.Kpn8883ORF4792P | |
| 4792 | M | M.Kpn9662II (100% identity) | M.Kpn8883ORF4792P | |
| 4793 | R | Kpn8895IIP (100% identity) | Kpn8883ORF4792P | |
| 4794 | phage integrase family site-specific | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5046 | Ankyrin repeats (3 copies) | |||
| 5047 | M | M.KspBL02ORF30550P (99% identity) | M.Kpn8883ORF5047P | |
| 5048 | Uncharacterised protein | |||
| 5106 | stability/partitioning protein | |||
| 5107 | M | M.Kpns9645ORF4475P (100% identity) | SAY | M.Kpn8883ORF5107P |
| 5108 | Uncharacterised protein | |||
| 5213 | transposase | |||
| 5214 | RM | Kpn13700ORF72P (100% identity) | GTTCNAG | Kpn8883IV |
| 5215 | integrase catalytic subunit | |||
| 5242 | Uncharacterised protein | |||
| 5243 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpn8883ORF5243P | |
| 5244 | DinI-like damage-inducible protein | |||
| 718 | sporulation domain-containing protein | |||
| 719 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn8883Dam |
| 720 | ribulose-phosphate 3-epimerase | |||
| 1003 | prophage protein | |||
| 1004 | M | M.KpnFF79ORF3280P (100% identity) | M.Kpn8883ORF1004P | |
| 1005 | Uncharacterised protein | |||
| 1638 | Uncharacterised protein | |||
| 1639 | M | M.Kpns9645ORF4261P (100% identity) | M.Kpn8883ORF1639P | |
| 1640 | transcriptional regulator AlpA family | |||
| 2237 | metal-dependent phosphohydrolase | |||
| ??? | M | M.Kpn8895ORF2337P (100% identity) | CCWGG | M.Kpn8883ORF2238P |
| 2239 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn8883ORF2238P | |
| 2240 | drug/metabolite transporter permease | |||
| 3100 | Uncharacterised protein | |||
| 3101 | M | M.Kpns9645ORF3577P (100% identity) | M.Kpn8883ORF3101P | |
| 3102 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5059 | Uncharacterised protein | |||
| 5060 | M | M.Kpn1864ORF29350P (100% identity) | AGACC | M.Kpn8883II |
| 5061 | R | Kpn1864ORF29350P (99% identity) | AGACC | Kpn8883IIP |
| 5062 | Uncharacterised protein | |||
| 2227 | Bundle-forming pilin | |||
| 2228 | R | Rte13038IP (97% identity) | CCGAG | Kpn8883IP |
| 2229 | M | M.KpnhvKP2ORF9415P (100% identity) | CCGAG | M.Kpn8883I |
| 2230 | SpnT | |||