Klebsiella pneumoniae NCTC8172 |
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Putative Klebsiella pneumoniae NCTC8172 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,388,061 bp
GenBank #: UGKZ00000000 (NZ_UGKZ00000000)
REBASE acronym: Kpn8172
Org_num: 39420
All begin NCTC8172_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4746 | Uncharacterised protein | |||
| 4747 | M | M.KpnVA684ORF22005P (100% identity) | TTACNNNNNTAG | M.Kpn8172I |
| 4748 | S | S.KpnV3ORF16575P (68% identity) | TTACNNNNNTAG | S1.Kpn8172I |
| ??? | S | S.Kpns555ORF12245P (30% identity) | S2.Kpn8172IP | |
| 4749 | R | KpnyORFBP (100% identity) | TTACNNNNNTAG | Kpn8172IP |
| 4750 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 541 | sporulation domain-containing protein | |||
| 542 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn8172Dam |
| 543 | ribulose-phosphate 3-epimerase | |||
| 1353 | plasmid-like protein | |||
| ??? | R | Kpn9184ORF1146P (100% identity) | Kpn8172ORF1354P | |
| 1355 | Zinc binding domain / DNA primase | |||
| 1917 | metal-dependent phosphohydrolase | |||
| ??? | M | M.Kpn9184ORF1689P (100% identity) | CCWGG | M.Kpn8172ORF1918P |
| 1919 | DNA mismatch endonuclease Vsr | |||
| ??? | phosphohydrolase | |||
| 1919 | V | V.KspC31DcmP (75% identity) | V.Kpn8172DcmP | |
| 1920 | drug/metabolite transporter permease | |||
| 2914 | Protein of uncharacterised function (DUF1133) | |||
| 2915 | M | M.Kpn9184ORF2651P (100% identity) | M.Kpn8172ORF2915P | |
| 2916 | Protein of uncharacterised function (DUF968) | |||
| 3353 | Uncharacterised protein | |||
| 3354 | M | M.Kpn9184ORF3079P (100% identity) | M.Kpn8172ORF3354P | |
| 3355 | PerC transcriptional activator | |||
| 4752 | Uncharacterised protein | |||
| 4753 | R | Kpn9184ORF4421P (100% identity) | Kpn8172ORF4753P | |
| 4754 | phage integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4739 | ISEc14 transposase A | |||
| 4740 | R | Kpn9184McrBP (100% identity) | Kpn8172McrBP | |
| 4741 | R | Kpntgc02McrCP (100% identity) | Kpn8172McrCP | |
| 4743 | IS3 family element, transposase orfA | |||