Helicobacter muridarum NCTC12714 |
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Putative Helicobacter muridarum NCTC12714 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,263,336 bp
GenBank #: UGJE00000000 (NZ_UGJE00000000)
REBASE acronym: Hmu12714
Org_num: 43565
All begin NCTC12714_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1621 | Uncharacterised protein | |||
| 1622 | M | M.HmuST1ORF4245P (100% identity) | M.Hmu12714ORF1622P | |
| 1623 | Protein of uncharacterised function (DUF3800) | |||
| 1624 | Uncharacterised protein | |||
| 1625 | S | S.HmuST1ORF4245P (96% identity) | S1.Hmu12714ORF1622P | |
| 1626 | S | S.HmuST1ORF1000P (84% identity) | S2.Hmu12714ORF1622P | |
| 1627 | modulator of drug activity MdaB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HmuST1ORF3200P (91% identity) | M.Hmu12714ORF1P | |
| ??? | R | Hmu12714ORF725P (100% identity) | Hmu12714ORF1P | |
| 4 | adenine-specific DNA methylase | |||
| 5 | Uncharacterised protein | |||
| ??? | M | M.Hmu12714ORF719P (93% identity) | M.Hmu12714ORF6P | |
| 9 | adenine-specific DNA methylase | |||
| 9 | adenine-specific DNA methylase | |||
| ??? | M | M.Hmu12714ORF718P (92% identity) | M.Hmu12714ORF10P | |
| 12 | DNA modification methyltransferase | |||
| 16 | Uncharacterised protein | |||
| ??? | R | HmuST1ORF3200P (54% identity) | Hmu12714ORF19P | |
| ??? | M | M.HmuST1ORF3200P (59% identity) | M.Hmu12714ORF19P | |
| 451 | Uncharacterised protein | |||
| 452 | M | M.HmuST1ORF3685P (91% identity) | M.Hmu12714ORF452P | |
| 453 | gluconolactonase | |||
| 717 | metallo-beta-lactamase family protein | |||
| 718 | M | M.HmuST1ORF3175P (97% identity) | M.Hmu12714ORF718P | |
| 719 | DNA modification methyltransferase | |||
| 718 | adenine-specific DNA methylase | |||
| ??? | M | M.Hsp6451ORF5965P (85% identity) | M.Hmu12714ORF719P | |
| 721 | Uncharacterised protein | |||
| 723 | adenine-specific DNA methylase | |||
| ??? | R | Hmu12714ORF1P (100% identity) | Hmu12714ORF725P | |
| 725 | M | M.HmuST1ORF3200P (100% identity) | M.Hmu12714ORF725P | |
| 726 | adenine specific DNA methyltransferase | |||
| 725 | Type II modification enzyme | |||
| ??? | M | M.HmuST1ORF3205P (98% identity) | CCGG | M.Hmu12714V |
| 728 | R | HmuST1ORF3205P (100% identity) | CCGG | Hmu12714VP |
| 729 | methyltransferase | |||
| 728 | endonuclease MjaVIP | |||
| 729 | M | M.HmuST1ORF3180P (100% identity) | M.Hmu12714ORF729P | |
| 730 | R | HmuST1ORF3180P (100% identity) | Hmu12714ORF729P | |
| 731 | adenylosuccinate lyase | |||
| 731 | adenylosuccinate lyase | |||
| 732 | M | M.HmuST1ORF3230P (100% identity) | GATATC | M.Hmu12714III |
| ??? | R | HmuST1ORF3230P (100% identity) | GATATC | Hmu12714IIIP |
| 734 | adenylosuccinate lyase | |||
| 734 | adenylosuccinate lyase | |||
| 735 | M | M.HmuST1ORF3245P (38% identity) | M.Hmu12714ORF735P | |
| 736 | molybdenum cofactor biosynthesis protein A | |||
| 1111 | 2-aminoethylphosphonate ABC transporter | |||
| 1112 | M | M1.HmuST1ORF8940P (100% identity) | M1.Hmu12714ORF1112P | |
| 1113 | R | HmuST1ORF8940P (86% identity) | Hmu12714ORF1112P | |
| ??? | M | M2.HmuST1ORF8940P (99% identity) | M2.Hmu12714ORF1112P | |
| 1116 | Type I restriction-modification system | |||
| 1116 | Type I restriction-modification system | |||
| 1117 | M | M.HmuST1ORF8960P (94% identity) | M.Hmu12714ORF1117P | |
| 1118 | site-specific type II DNA methyltransferase | |||
| 1117 | type II DNA modification enzyme | |||
| 1118 | M | M.Hsp1616ORF1245P (92% identity) | M.Hmu12714ORF1118P | |
| 1119 | R | HmuST1ORF6080P (87% identity) | Hmu12714ORF1118P | |
| 1120 | ABC-type sugar transport system, periplasmic | |||
| 1120 | ABC-type sugar transport system, periplasmic | |||
| 1121 | R | Hsp6451ORF8740P (50% identity) | Hmu12714ORF1125P | |
| 1122 | type II restriction endonuclease TdeIII | |||
| 1123 | Modification methylase BamHI | |||
| 1124 | Uncharacterised protein | |||
| 1125 | M | M.HmuST1ORF6105P (97% identity) | M.Hmu12714ORF1125P | |
| 1126 | guanosine monophosphate synthetase GuaA | |||
| 1122 | type II restriction endonuclease TdeIII | |||
| 1123 | M | M.HmuST1ORF6095P (100% identity) | M.Hmu12714ORF1123P | |
| 1124 | Uncharacterised protein | |||
| 1126 | guanosine monophosphate synthetase GuaA | |||
| ??? | R | HmuST1ORF6115P (100% identity) | CCNNGG | Hmu12714IVP |
| 1129 | M | M.HmuST1ORF6115P (100% identity) | CCNNGG | M.Hmu12714IV |
| 1130 | GMP synthase | |||
| 1157 | type III restriction-modification system | |||
| ??? | M | M.HmuST1ORF2160P (92% identity) | M.Hmu12714ORF1158P | |
| 1160 | adenine specific DNA methyltransferase | |||
| 1159 | Type II adenine specific DNA methyltransferase | |||
| 1160 | RM | HmuST1ORF2160P (83% identity) | Hmu12714ORF1160P | |
| 1161 | adenine specific DNA methyltransferase | |||
| 1638 | multidrug-efflux protein | |||
| ??? | RM | HmuST1ORF6595P (100% identity) | Hmu12714ORF1639P | |
| 1641 | S | S.HmuST1ORF6595P (86% identity) | S1.Hmu12714ORF1639P | |
| 1642 | S | S2.HbiMUORF9990P (51% identity) | S2.Hmu12714ORF1639P | |
| 1643 | nodulation protein L | |||
| 1650 | modulator of drug activity MdaB | |||
| ??? | RM | HmuST1ORF475P (100% identity) | Hmu12714ORF1651P | |
| 1653 | aminoalkylphosphonic acid N-acetyltransferase | |||
| 1659 | MerR family transcription regulator | |||
| 1660 | M | M.HmuST1ORF4235P (100% identity) | GCATC | M1.Hmu12714II |
| 1661 | M | M.HmuST1ORF4230P (100% identity) | GCATC | M2.Hmu12714II |
| 1662 | R | HhiYS1ORFQP (65% identity) | GCATC | Hmu12714IIP |
| 1663 | Uncharacterised protein | |||
| 1674 | Uncharacterised protein | |||
| 1675 | M | M.HmuST1ORF4170P (100% identity) | CGCG | M.Hmu12714VI |
| 1676 | oxidoreductase, aldo/keto reductase family | |||
| 1691 | CAAX protease | |||
| 1693 | RM | HmuST1ORF4975P (97% identity) | Hmu12714ORF1693P | |
| 1694 | Type IIG restriction-modification enzyme | |||
| 1697 | Uncharacterised protein | |||
| 1698 | R | HmuST1ORF5370P (100% identity) | Hmu12714ORF1699P | |
| 1699 | M | M.HmuST1ORF5365P (69% identity) | M.Hmu12714ORF1699P | |
| 1700 | adenine specific DNA methyltransferase | |||
| 1697 | Uncharacterised protein | |||
| 1698 | R | HmuST1ORF5370P (100% identity) | Hmu12714ORF1698P | |
| 1699 | DNA methyltransferase C1 | |||
| 1699 | DNA methyltransferase C1 | |||
| 1700 | M | M.HhiYS1ORFC1P (84% identity) | M.Hmu12714ORF1700P | |
| 1701 | Uncharacterized conserved protein | |||
| 1708 | Uncharacterised protein | |||
| 1709 | RM | HmuST1ORF7035P (66% identity) | Hmu12714ORF1709P | |
| 1710 | 4-carboxymuconolactone decarboxylase | |||
| 1713 | Uncharacterised protein | |||
| 1714 | R | HmuST1ORF7005P (100% identity) | GAAGA | Hmu12714IP |
| 1715 | M | M2.HmuST1ORF7005P (100% identity) | GAAGA | M1.Hmu12714I |
| 1716 | Uncharacterised protein | |||
| 1717 | M | M1.HmuST1ORF7005P (100% identity) | GAAGA | M2.Hmu12714I |
| 1718 | cell division protein FtsK | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 244 | saccharopine dehydrogenase | |||
| 245 | R | HmuST1ORF3055P (100% identity) | Hmu12714ORF246P | |
| 246 | M | M2.HmuST1ORF3055P (100% identity) | M.Hmu12714ORF246P | |
| 247 | modification methylase | |||
| 1295 | para-aminobenzoate synthase glutamine | |||
| 1296 | M | M1.HmuST1ORF3055P (90% identity) | M.Hmu12714ORF1296P | |
| 1297 | inner membrane protein | |||
| 1631 | aldo/keto reductase | |||
| ??? | R | HmuST1ORF6565P (57% identity) | Hmu12714ORF1634P | |
| 1634 | M | M.HmuST1ORF6565P (82% identity) | M.Hmu12714ORF1634P | |
| 1635 | Alkyl hydroperoxide reductase, large subunit | |||