Helicobacter fennelliae NCTC13101 |
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Putative Helicobacter fennelliae NCTC13101 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,158,551 bp
GenBank #: UGID00000000 (NZ_UGID00000000)
REBASE acronym: Hfe13101
Org_num: 43563
All begin NCTC13101_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 972 | GIY-YIG nuclease superfamily protein | |||
| 973 | S | S.Hbi43879ORF1780P (64% identity) | S1.Hfe13101ORF977P | |
| 974 | Uncharacterized protein conserved in bacteria | |||
| ??? | R | HbiAAQJHORF8670P (60% identity) | Hfe13101ORF977P | |
| ??? | M | M.HciP01DORFHP (98% identity) | M.Hfe13101ORF977P | |
| 979 | CAAX protease | |||
| 980 | S | S.Hfe13102V (62% identity) | S2.Hfe13101ORF977P | |
| 981 | cation diffusion facilitator family transporter | |||
| 1997 | saccharopine dehydrogenase | |||
| 1998 | M | M.Hfe13102ORF1993P (99% identity) | M.Hfe13101ORF1998P | |
| 1999 | Fic family protein | |||
| 2000 | Uncharacterised protein | |||
| 2001 | Uncharacterised protein | |||
| 2002 | S | S.Hfe50ORF996P (36% identity) | S.Hfe13101ORF1998P | |
| 2003 | thiamine biosynthesis protein (thi) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 86 | oxidoreductase, aldo/keto reductase family | |||
| 87 | M | M.Hfe50ORF2137P (100% identity) | GCATC | M.Hfe13101VI |
| 88 | Uncharacterised protein | |||
| 89 | R | Hfe11613IP (60% identity) | GCATC | Hfe13101VIP |
| 90 | type II methylase | |||
| 86 | oxidoreductase, aldo/keto reductase family | |||
| 87 | Adenine-specific methyltransferase | |||
| 89 | AlwI restriction endonuclease family protein | |||
| 90 | M | M.Hfe50ORF2139P (100% identity) | M.Hfe13101ORF90P | |
| 91 | nodulation protein L | |||
| 105 | NADP-dependent L-serine/L-allo-threonine | |||
| 106 | R | Hfe13102IP (100% identity) | GGATG | Hfe13101VP |
| 107 | M | M.Hfe50ORF2159P (99% identity) | GGATG | M1.Hfe13101V |
| 108 | M | M2.Hfe13102I (99% identity) | GGATG | M2.Hfe13101V |
| 109 | Uncharacterised protein | |||
| 111 | Phosphoglycolate phosphatase | |||
| 112 | M | M.Hfe13102ORF143P (100% identity) | M.Hfe13101ORF112P | |
| ??? | R | Hfe13102ORF143P (80% identity) | Hfe13101ORF112P | |
| 114 | SAM-dependent methyltransferase | |||
| 563 | Uncharacterised protein | |||
| 565 | M | M.Hsp6451ORF9990P (55% identity) | CATG | M.Hfe13101I |
| 566 | Uncharacterised protein | |||
| 919 | Type II adenine specific DNA methyltransferase | |||
| 920 | M | M.OspMM50ORF6980P (56% identity) | M.Hfe13101ORF920P | |
| 921 | R | CbaCHKC6ORF1085P (33% identity) | Hfe13101ORF920P | |
| 922 | Uncharacterised protein | |||
| 1153 | Uncharacterised protein | |||
| 1154 | R | Hfe13102ORF825P (97% identity) | GTSAC | Hfe13101VIIP |
| 1155 | M | M.Hci629ORFEP (99% identity) | GTSAC | M.Hfe13101VII |
| 1156 | Uncharacterised protein | |||
| 1238 | acyltransferase | |||
| 1239 | M | M.Hfe13102ORF766P (99% identity) | M.Hfe13101ORF1239P | |
| 1240 | type II DNA modification enzyme | |||
| 1240 | type II DNA modification enzyme | |||
| 1241 | R | HciT36ORF884P (95% identity) | GGNCC | Hfe13101IIIP |
| 1242 | M | M.Hfe13102ORF764P (99% identity) | GGNCC | M.Hfe13101III |
| 1243 | GMP synthase | |||
| 1859 | Uncharacterised protein | |||
| 1860 | M | M.Hfe50ORF1575P (100% identity) | M.Hfe13101ORF1860P | |
| 1861 | Uncharacterised protein | |||
| 1873 | Protein involved in cell division | |||
| 1874 | M | M.Hfe13102II (99% identity) | GTNNAC | M.Hfe13101IV |
| 1875 | R | Hfe13102IIP (100% identity) | GTNNAC | Hfe13101IVP |
| 1876 | phage-related CUP0950-like protein | |||
| 1978 | Uncharacterized protein conserved in archaea | |||
| 1979 | RM | Hfe50ORF975P (18% identity) | Hfe13101ORF1979AP | |
| 1980 | RM | Hfe50ORF975P (80% identity) | Hfe13101ORF1979BP | |
| 1981 | Integral membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 718 | Uncharacterised protein | |||
| ??? | M | M.Hfe13102ORF1258P (98% identity) | M.Hfe13101ORF719P | |
| 721 | R | Hci611ORFCP (96% identity) | Hfe13101ORF719P | |
| 722 | Uncharacterised protein | |||
| 1623 | Oleate hydratase | |||
| 1624 | R | Hfe13102ORF1625P (100% identity) | Hfe13101ORF1625P | |
| ??? | M | M.Hfe13102ORF1625P (96% identity) | M.Hfe13101ORF1625P | |
| 1627 | 4-oxalocrotonate tautomerase enzyme family | |||
| 1786 | Uncharacterized conserved protein | |||
| 1787 | M | M.Hfe13102ORF1785P (98% identity) | M.Hfe13101ORF1787P | |
| 1788 | Predicted transcriptional regulator | |||