Helicobacter cinaedi NCTC12221 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter cinaedi NCTC12221 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,917,254 bp
GenBank #: UGHZ00000000 (NZ_UGHZ00000000)
REBASE acronym: Hci12221
Org_num: 43561
All begin NCTC12221_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1479 | aspartyl/glutamyl-tRNA amidotransferase subunit | |||
| 1480 | RM | HbiAAQJHORF5415P (74% identity) | Hci12221ORF1480P | |
| 1481 | membrane protein | |||
| 1500 | Mec-2 family protein | |||
| 1501 | S | S.Hwi488ORF8785P (82% identity) | S3.Hci12221ORF1504P | |
| 1502 | S | S2.Che9613ORF8410P (93% identity) | S2.Hci12221ORF1504P | |
| 1503 | S | S.HpyC1ORFAP (25% identity) | S1.Hci12221ORF1504P | |
| 1504 | RM | Che9613ORF8410P (92% identity) | Hci12221ORF1504P | |
| 1505 | alanyl-tRNA synthetase | |||
| 162 | RNA polymerase factor sigma-54 | |||
| 163 | R | HciT36ORF84P (98% identity) | CATG | Hci12221IP |
| 164 | M | M.HciT36ORF84P (93% identity) | CATG | M.Hci12221I |
| 165 | 30S ribosomal protein S2 | |||
| 379 | uridylate kinase | |||
| 380 | RM | Hca12410ORF427P (74% identity) | Hci12221ORF380P | |
| 381 | Uncharacterised protein | |||
| 486 | adenylosuccinate lyase | |||
| 487 | R | Che9613ORF2625P (36% identity) | GGCC | Hci12221IVP |
| 488 | Uncharacterised protein | |||
| 489 | M | M.Hci12219ORF1275P (97% identity) | GGCC | M.Hci12221IV |
| 490 | Uncharacterised protein | |||
| 795 | Protein of uncharacterised function DUF262 | |||
| 796 | R | Hci94105ORF765P (98% identity) | GTSAC | Hci12221IIIP |
| ??? | M | M.Hci94105ORF765P (85% identity) | GTSAC | M.Hci12221III |
| 798 | Uncharacterized conserved protein | |||
| 806 | RloF like protein | |||
| 807 | M | M.Hci94105ORF771P (98% identity) | GANTC | M.Hci12221II |
| 808 | RDD family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 119 | saccharopine dehydrogenase | |||
| 120 | M | M.Hca12410ORF699P (76% identity) | M.Hci12221ORF120P | |
| 121 | Uncharacterized conserved protein | |||
| 122 | Uncharacterised protein | |||
| 123 | R | Hbi43879ORF1879P (95% identity) | Hci12221ORF120P | |
| 124 | methyl-accepting chemotaxis protein | |||