Haemophilus haemoglobinophilus NCTC8540 |
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Putative Haemophilus haemoglobinophilus NCTC8540 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,391,845 bp
GenBank #: UGHJ00000000 (NZ_UGHJ00000000)
REBASE acronym: Hha8540
Org_num: 43548
All begin NCTC8540_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2304 | Uncharacterized conserved protein | |||
| 2305 | R | Hha8540VIP (100% identity) | Hha8540ORF2307P | |
| 2306 | Uncharacterised protein | |||
| 2307 | M | M.Hha8540VI (100% identity) | M.Hha8540ORF2307P | |
| 2308 | S | S2.Hha10619ORF8P (84% identity) | S1.Hha8540ORF2307P | |
| 2309 | site-specific tyrosine recombinase | |||
| 2310 | S | S1.Hha10619ORF8P (100% identity) | S2.Hha8540ORF2307P | |
| 2311 | fepc protein | |||
| 16 | Predicted permease, DMT superfamily | |||
| 17 | M | M.Hha10619IV (100% identity) | AAGNNNNNNCTC | M.Hha8540IV |
| 18 | glutamate-1-semialdehyde 2,1-aminomutase | |||
| 19 | S | S.Hha10619IV (100% identity) | AAGNNNNNNCTC | S.Hha8540IV |
| 20 | filamentation induced by cAMP protein fic | |||
| 21 | R | Hha10619IVP (100% identity) | AAGNNNNNNCTC | Hha8540IVP |
| 22 | dihydroxy-acid dehydratase | |||
| 26 | Uncharacterised protein | |||
| 27 | R | Hha10619VIP (100% identity) | GATTNNNNNNCGT | Hha8540VP |
| 28 | S | S.Hha10619VI (100% identity) | GATTNNNNNNCGT | S.Hha8540V |
| 29 | transcriptional regulator containing an hth | |||
| 30 | M | M.Hha10619VI (99% identity) | GATTNNNNNNCGT | M.Hha8540V |
| 31 | isoleucyl-tRNA synthetase | |||
| 67 | Uncharacterised protein | |||
| 68 | S | S.Hha10619I (100% identity) | RTAYNNNNNNGTC | S.Hha8540I |
| 69 | phosphoribosylformylglycinamidine synthase | |||
| 279 | catalase | |||
| 280 | M | M.Hha10619ORF2144P (71% identity) | GACNNNNNTAA | M.Hha8540III |
| 281 | S | S.Hha10619ORF2144P (100% identity) | GACNNNNNTAA | S.Hha8540III |
| 282 | Uncharacterised protein | |||
| 283 | Transposase and inactivated derivatives | |||
| 284 | transposase | |||
| 285 | Transposase and inactivated derivatives | |||
| 286 | R | Hha10619ORF2144P (100% identity) | GACNNNNNTAA | Hha8540IIIP |
| 287 | oxidoreductase with FAD/NAD(P)-binding domain | |||
| 362 | 3-dehydroquinate dehydratase | |||
| 363 | R | Hha10619IIP (100% identity) | GAYNNNNNNCTTGY | Hha8540IIP |
| 364 | Transposase | |||
| 365 | S | S.Hha10619II (100% identity) | GAYNNNNNNCTTGY | S.Hha8540II |
| 366 | M | M.Hha10619II (100% identity) | GAYNNNNNNCTTGY | M.Hha8540II |
| 370 | cystathionine gamma-synthase | |||
| 492 | Uncharacterized conserved protein | |||
| 493 | R | Hha8540ORF2307P (100% identity) | GAYANNNNNNNNGTG | Hha8540VIP |
| 494 | Uncharacterised protein | |||
| 495 | M | M.Hha8540ORF2307P (100% identity) | GAYANNNNNNNNGTG | M.Hha8540VI |
| 496 | S | S1.Hha8540ORF2307P (75% identity) | GAYANNNNNNNNGTG | S1.Hha8540VI |
| 497 | site-specific tyrosine recombinase | |||
| 498 | S | S1.Hha10619V (77% identity) | S2.Hha8540VIP | |
| 499 | fepc protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 441 | Molecular chaperone, HSP90 family | |||
| 442 | M | M.Hha10619ORF2307P (100% identity) | M.Hha8540ORF442P | |
| 443 | type-2 restriction enzyme haeiii | |||
| 442 | methyltransferase | |||
| 443 | R | Hha10619ORF2309P (100% identity) | Hha8540ORF444P | |
| 444 | M | M.Pmi33270ORF1413P (97% identity) | M.Hha8540ORF444P | |
| 445 | C | C.Pmi11808ORF1540P (100% identity) | C.Hha8540ORF444P | |
| 446 | relaxase/mobilization nuclease family protein | |||
| 1167 | phosphoenolpyruvate carboxylase | |||
| 1168 | RM | Hha10619ORF733P (100% identity) | Hha8540ORF1171P | |
| 1169 | Uncharacterised protein | |||
| 1170 | M | M2.Hha10619ORF733P (100% identity) | M2.Hha8540ORF1171P | |
| 1171 | M | M1.Hha10619ORF733P (100% identity) | M1.Hha8540ORF1171P | |
| 1172 | dsDNA-mimic protein | |||
| 1262 | transcriptional regulator | |||
| 1263 | R | Hha10619IIIP (100% identity) | TTCGAA | Hha8540VIIP |
| 1264 | M | M.Hha10619III (100% identity) | TTCGAA | M.Hha8540VII |
| 1265 | IS1016 transposase | |||
| 1473 | Uncharacterised protein | |||
| 1474 | M | M.Hha1659ORF1376P (100% identity) | M.Hha8540ORF1474P | |
| 1475 | replicative DNA helicase | |||
| 1576 | ribulose-phosphate 3-epimerase | |||
| 1577 | M | M.Hha1659ORF936P (100% identity) | M.Hha8540ORF1577P | |
| 1578 | autotransported protein Lav | |||
| 2161 | XRE family transcriptional regulator | |||
| 2162 | H | H.Hha10619ORF1441P (100% identity) | H.Hha8540ORF2162P | |
| 2163 | R | Hha10619ORF1441P (100% identity) | Hha8540ORF2162P | |
| 2164 | DNA-cytosine methyltransferase | |||
| 2163 | type II site-specific deoxyribonuclease | |||
| 2164 | M | M.Hha10619ORF1441P (100% identity) | M.Hha8540ORF2164P | |
| 2165 | transposase | |||
| 2200 | plasmid stability-like protein/nucleic | |||
| ??? | RM | Hha10619ORF1402P (99% identity) | Hha8540ORF2202P | |
| 2204 | 50S ribosomal protein L11 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 951 | dihydro-orotate oxidase, FMN-linked | |||
| ??? | M | M.Hha1659ORF1934P (95% identity) | M.Hha8540ORF952P | |
| 954 | R | Hha10619ORF514P (100% identity) | Hha8540ORF952P | |
| 955 | phosphotransferase domain-containing protein | |||
| 1268 | transposase | |||
| 1269 | M | M.Hha10619ORF831P (100% identity) | M.Hha8540ORF1269P | |
| 1270 | R | Hha10619ORF831P (100% identity) | Hha8540ORF1269P | |
| 1272 | sodium/calcium exchange protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 430 | UDP-glucose pyrophosphorylase | |||
| ??? | M | M.Hha10619ORF2296P (100% identity) | M.Hha8540ORF431P | |
| 432 | 3-dehydroquinate synthase | |||