Haemophilus haemoglobinophilus NCTC10619 |
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Putative Haemophilus haemoglobinophilus NCTC10619 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,396,110 bp
GenBank #: UGHE00000000 (NZ_UGHE00000000)
REBASE acronym: Hha10619
Org_num: 43546
All begin NCTC10619_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4 | Uncharacterized conserved protein | |||
| ??? | R | Hha8540VIP (82% identity) | Hha10619ORF8P | |
| 7 | Uncharacterised protein | |||
| ??? | M | M.Hha8540VI (78% identity) | M.Hha10619ORF8P | |
| 11 | Uncharacterised protein | |||
| 12 | S | S2.Hha8540ORF2307P (100% identity) | S1.Hha10619ORF8P | |
| 13 | site-specific tyrosine recombinase | |||
| 14 | S | S1.Hha8540ORF2307P (84% identity) | S2.Hha10619ORF8P | |
| 15 | fepc protein | |||
| 52 | Uncharacterized conserved protein | |||
| 53 | R | Hha8540VIP (100% identity) | CAGNNNNNNNNTGG | Hha10619VP |
| 54 | Uncharacterised protein | |||
| 55 | M | M.Hha8540VI (100% identity) | CAGNNNNNNNNTGG | M.Hha10619V |
| 56 | S | S1.Hha1659ORF2467P (99% identity) | CAGNNNNNNNNTGG | S1.Hha10619V |
| 57 | site-specific tyrosine recombinase | |||
| 58 | S | S1.Hha8540VI (41% identity) | S2.Hha10619VP | |
| 59 | S | S2.Hha10619ORF8P (24% identity) | CAGNNNNNNNNTGG | S3.Hha10619V |
| 60 | fepc protein | |||
| 1237 | phosphoribosylformylglycinamidine synthase | |||
| 1238 | S | S.Hha8540I (100% identity) | RTAYNNNNNNGTC | S.Hha10619I |
| 1239 | Uncharacterised protein | |||
| 1275 | isoleucyl-tRNA synthetase | |||
| 1276 | M | M.Hha8540V (99% identity) | GATTNNNNNNCGT | M.Hha10619VI |
| 1277 | transcriptional regulator containing an hth | |||
| 1278 | S | S.Hha8540V (100% identity) | GATTNNNNNNCGT | S.Hha10619VI |
| 1279 | R | Hha8540VP (100% identity) | GATTNNNNNNCGT | Hha10619VIP |
| 1280 | Uncharacterised protein | |||
| 1284 | dihydroxy-acid dehydratase | |||
| 1285 | R | Hha8540IVP (100% identity) | AAGNNNNNNCTC | Hha10619IVP |
| 1286 | filamentation induced by cAMP protein fic | |||
| 1287 | S | S.Hha8540IV (100% identity) | AAGNNNNNNCTC | S.Hha10619IV |
| 1288 | glutamate-1-semialdehyde 2,1-aminomutase | |||
| 1289 | M | M.Hha8540IV (100% identity) | AAGNNNNNNCTC | M.Hha10619IV |
| 1290 | Predicted permease, DMT superfamily | |||
| 2143 | Uncharacterised protein | |||
| 2144 | M | M.Hha8540III (71% identity) | M.Hha10619ORF2144P | |
| 2145 | S | S.Hha8540III (100% identity) | S.Hha10619ORF2144P | |
| 2146 | Uncharacterised protein | |||
| 2147 | Transposase and inactivated derivatives | |||
| 2148 | transposase | |||
| 2149 | Transposase and inactivated derivatives | |||
| 2150 | R | Hha8540IIIP (100% identity) | Hha10619ORF2144P | |
| 2151 | oxidoreductase with FAD/NAD(P)-binding domain | |||
| 2227 | 3-dehydroquinate dehydratase | |||
| 2228 | R | Hha8540IIP (100% identity) | GAYNNNNNNCTTGY | Hha10619IIP |
| 2229 | Transposase | |||
| 2230 | S | S.Hha8540II (100% identity) | GAYNNNNNNCTTGY | S.Hha10619II |
| 2231 | M | M.Hha8540II (100% identity) | GAYNNNNNNCTTGY | M.Hha10619II |
| 2235 | cystathionine gamma-synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 729 | phosphoenolpyruvate carboxylase | |||
| 730 | RM | Hha8540ORF1171P (100% identity) | Hha10619ORF733P | |
| 731 | Uncharacterised protein | |||
| 732 | M | M2.Hha8540ORF1171P (100% identity) | M2.Hha10619ORF733P | |
| 733 | M | M1.Hha8540ORF1171P (100% identity) | M1.Hha10619ORF733P | |
| 734 | dsDNA-mimic protein | |||
| 824 | transcriptional regulator | |||
| 825 | R | Hha8540VIIP (100% identity) | TTCGAA | Hha10619IIIP |
| 826 | M | M.Hha8540VII (100% identity) | TTCGAA | M.Hha10619III |
| 827 | IS1016 transposase | |||
| 1033 | Uncharacterised protein | |||
| 1034 | M | M.Hha8540ORF1474P (100% identity) | M.Hha10619ORF1034P | |
| 1035 | replicative DNA helicase | |||
| 1400 | 50S ribosomal protein L11 | |||
| ??? | RM | Hha8540ORF2202P (99% identity) | Hha10619ORF1402P | |
| 1404 | plasmid stability-like protein/nucleic | |||
| 1440 | Uncharacterised protein | |||
| 1441 | M | M.Hha8540ORF2164P (100% identity) | M.Hha10619ORF1441P | |
| 1442 | R | Hha8540ORF2162P (100% identity) | Hha10619ORF1441P | |
| 1443 | H | H.Hha8540ORF2162P (100% identity) | H.Hha10619ORF1441P | |
| 1444 | XRE family transcriptional regulator | |||
| 2029 | autotransported protein Lav | |||
| 2030 | M | M.Hha8540ORF1577P (100% identity) | M.Hha10619ORF2030P | |
| 2031 | ribulose-phosphate 3-epimerase | |||
| 2306 | Molecular chaperone, HSP90 family | |||
| 2307 | M | M.Hha8540ORF442P (100% identity) | M.Hha10619ORF2307P | |
| 2308 | type-2 restriction enzyme haeiii | |||
| 2307 | methyltransferase | |||
| 2308 | R | Hha8540ORF444P (100% identity) | Hha10619ORF2309P | |
| 2309 | M | M.Pmi33270ORF1413P (97% identity) | M.Hha10619ORF2309P | |
| 2310 | C | C.Pmi11808ORF1540P (100% identity) | C.Hha10619ORF2309P | |
| 2311 | relaxase/mobilization nuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 513 | dihydro-orotate oxidase, FMN-linked | |||
| ??? | M | M.Hha1659ORF1934P (96% identity) | M.Hha10619ORF514P | |
| 516 | R | Hha8540ORF952P (100% identity) | Hha10619ORF514P | |
| 517 | phosphotransferase domain-containing protein | |||
| 830 | transposase | |||
| 831 | M | M.Hha8540ORF1269P (100% identity) | M.Hha10619ORF831P | |
| 832 | R | Hha8540ORF1269P (100% identity) | Hha10619ORF831P | |
| 834 | sodium/calcium exchange protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2295 | UDP-glucose pyrophosphorylase | |||
| ??? | M | M.Hha8540ORF431P (100% identity) | M.Hha10619ORF2296P | |
| 2297 | 3-dehydroquinate synthase | |||