Escherichia coli NCTC9965 |
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Putative Escherichia coli NCTC9965 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,901,208 bp
GenBank #: UGEN00000000 (NZ_UGEN00000000)
REBASE acronym: EcoC9965
Org_num: 43872
All begin NCTC9965_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4470 | Uncharacterized conserved protein | |||
| ??? | M | M.EcoRG065ORF11505P (96% identity) | M.EcoC9965ORF4471P | |
| 4475 | S | S.EcoRG065ORF11505P (19% identity) | S1.EcoC9965ORF4471P | |
| 4476 | S | S.Eco11115ORF4151P (73% identity) | S2.EcoC9965ORF4471P | |
| ??? | R | Eco11115ORF4151P (99% identity) | EcoC9965ORF4471P | |
| 4483 | protein YjiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23 | YfdA | |||
| 24 | M | M.SflN92ORF24820P (100% identity) | M.EcoC9965ORF24P | |
| 25 | cytoplasmic protein | |||
| 503 | DamX protein | |||
| 504 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC9965Dam |
| 505 | ribulose-phosphate 3-epimerase | |||
| 611 | membrane protein | |||
| 612 | M | M.Eco11115ORF539P (100% identity) | ATGCAT | M.EcoC9965ORF612P |
| 613 | DNA-binding protein Fis | |||
| 2114 | phosphohydrolase | |||
| 2115 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC9965DcmP |
| 2116 | V | V.SsoSE61DcmP (100% identity) | V.EcoC9965DcmP | |
| 2117 | DMT superfamily transporter inner | |||
| 2562 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC9965ORF2563P | |
| 2564 | membrane protein | |||
| 4071 | Predicted transcriptional regulator | |||
| 4072 | R | Eco26C21DptFP (100% identity) | EcoC9965DptFP | |
| 4073 | DNA phosphorothioation-dependent restriction | |||
| 4072 | DNA phosphorothioation-dependent restriction | |||
| 4073 | R | SflFF24DptGP (100% identity) | EcoC9965DptGP | |
| ??? | hypothetical protein | |||
| 4073 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | Eco11115DptHP (99% identity) | EcoC9965DptHP | |
| 4076 | Uncharacterised protein | |||
| 4079 | Uncharacterised protein | |||
| 4080 | M | M.Eco11115DndEP (100% identity) | M.EcoC9965DndEP | |
| 4081 | ATPase involved in DNA thiolation | |||
| 4080 | DNA thiolation protein; phage protein | |||
| 4081 | M | M.Eco11115DndDP (100% identity) | M.EcoC9965DndDP | |
| 4082 | PUA domain (predicted RNA-binding domain) | |||
| 4081 | ATPase involved in DNA thiolation | |||
| 4082 | M | M.Eco26C21DndCP (100% identity) | M.EcoC9965DndCP | |
| 4083 | DNA thiolation protein; phage protein | |||
| 4082 | PUA domain (predicted RNA-binding domain) | |||
| 4083 | M | M.Eco26C21DndBP (100% identity) | M.EcoC9965DndBP | |
| 4084 | DNA-binding prophage protein | |||