Escherichia coli NCTC9778 |
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Putative Escherichia coli NCTC9778 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,295,609 bp
GenBank #: UGAI00000000 (NZ_UGAI00000000)
REBASE acronym: EcoC9778
Org_num: 43867
All begin NCTC9778_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4786 | methylated adenine and cytosine restriction | |||
| ??? | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoC9778IP |
| ??? | M | M.SenHNK130ORF17125P (93% identity) | AACNNNNNNGTGC | M.EcoC9778I |
| ??? | S | S.Ecos69ORF1130P (99% identity) | AACNNNNNNGTGC | S.EcoC9778I |
| 4798 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5683 | cytoplasmic protein | |||
| 5684 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC9778ORF5684P |
| 5685 | YfdA | |||
| 459 | DamX protein | |||
| 460 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9778Dam |
| 461 | ribulose-phosphate 3-epimerase | |||
| 573 | membrane protein | |||
| ??? | M | M.Sdy12039ORFBP (99% identity) | ATGCAT | M.EcoC9778ORF574P |
| 575 | DNA-binding protein Fis | |||
| 3451 | DMT superfamily transporter inner | |||
| 3452 | V | V.SsoSE61DcmP (100% identity) | V.EcoC9778DcmP | |
| 3453 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC9778DcmP |
| 3454 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4785 | GTP-binding protein YjiA | |||
| 4786 | R | SenHNK130MrrP (100% identity) | EcoC9778MrrP | |
| 4787 | type I restriction enzyme EcoKI subunit R | |||
| 4796 | EcoKI restriction-modification system protein | |||
| ??? | R | SenHNK130McrBP (100% identity) | EcoC9778McrBP | |
| 4799 | R | SenHNK130McrCP (100% identity) | EcoC9778McrCP | |