Escherichia coli NCTC9707 |
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Putative Escherichia coli NCTC9707 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,274,845 bp
GenBank #: UGGC00000000 (NZ_UGGC00000000)
REBASE acronym: EcoC9707
Org_num: 43862
All begin NCTC9707_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 975 | restriction methylase | |||
| 976 | M | M.EcoS6995ORFEP (100% identity) | CYYANNNNNNRTGA | M.EcoC9707I |
| 977 | S | S.EcoPEC0009ORF18310P (100% identity) | CYYANNNNNNRTGA | S.EcoC9707I |
| 978 | R | EcoS6995ORFEP (100% identity) | CYYANNNNNNRTGA | EcoC9707IP |
| 979 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 36 | cytoplasmic protein | |||
| 37 | M | M.Sso866ORF27155P (100% identity) | M.EcoC9707ORF37P | |
| 38 | transposase of ISEc13 | |||
| 4083 | phosphohydrolase | |||
| 4084 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoC9707DcmP |
| 4085 | V | V.EcoSC477DcmP (100% identity) | V.EcoC9707DcmP | |
| 4086 | DMT superfamily transporter inner | |||
| 3609 | YfdA | |||
| 3610 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoC9707ORF3610P |
| 3611 | cytoplasmic protein | |||
| 146 | cytoplasmic protein | |||
| 147 | M | M.Sso866ORF27155P (100% identity) | M.EcoC9707ORF147P | |
| 148 | transposase of ISEc13 | |||
| 4016 | lipoprotein | |||
| 4017 | M | M.EcoS7438ORFNP (99% identity) | M.EcoC9707ORF4017P | |
| 4021 | anti-adapter protein IraM | |||
| 4895 | transposase subunit | |||
| ??? | M | M.Eal9362ORFHP (100% identity) | M.EcoC9707ORF4898P | |
| 4900 | transposase | |||
| 971 | endonuclease | |||
| 972 | R | EcoE234869ORFAP (99% identity) | EcoC9707ORF972P | |
| 973 | McrC family protein, McrBC 5-methylcytosine | |||
| 2110 | DamX protein | |||
| 2111 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9707Dam |
| 2112 | ribulose-phosphate 3-epimerase | |||
| 2216 | membrane protein | |||
| 2217 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoC9707ORF2217P |
| 2218 | DNA-binding protein Fis | |||
| 3223 | Predicted ATP-binding protein involved in | |||
| 3224 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.EcoC9707II |
| 3225 | phage replication protein | |||
| 3470 | lipoprotein | |||
| 3471 | M | M.EcoS6995ORFAP (99% identity) | M.EcoC9707ORF3471P | |
| 3476 | YjhS | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 972 | restriction endonuclease | |||
| 973 | R | EcoS6995McrCP (100% identity) | EcoC9707McrCP | |
| 974 | R | EcoS6995McrBP (100% identity) | EcoC9707McrBP | |
| 975 | restriction methylase | |||