Escherichia coli NCTC9116 |
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Putative Escherichia coli NCTC9116 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,179,561 bp
GenBank #: UGDA00000000 (NZ_UGDA00000000)
REBASE acronym: EcoC9116
Org_num: 43851
All begin NCTC9116_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4633 | methylated adenine and cytosine restriction | |||
| 4634 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoC9116IP |
| 4635 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoC9116I |
| 4636 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoC9116I |
| 4638 | DEAD-box helicase-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 58 | YfdA | |||
| 59 | M | M.EcoC9123ORF173P (100% identity) | M.EcoC9116ORF59P | |
| 60 | cytoplasmic protein | |||
| 695 | DamX protein | |||
| 696 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC9116Dam |
| 697 | ribulose-phosphate 3-epimerase | |||
| 831 | membrane protein | |||
| 832 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC9116ORF832P |
| 833 | DNA-binding protein Fis | |||
| 2424 | phosphohydrolase | |||
| ??? | M | M.Eco3946DcmP (99% identity) | CCWGG | M.EcoC9116DcmP |
| 2427 | V | V.Ecos195DcmP (100% identity) | V.EcoC9116DcmP | |
| 2428 | DMT superfamily transporter inner | |||
| 2840 | exonuclease from phage origin | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC9116ORF2841P | |
| 2842 | membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4632 | GTP-binding protein YjiA | |||
| 4633 | R | Ssp28760MrrP (100% identity) | EcoC9116MrrP | |
| 4634 | type I restriction enzyme EcoKI subunit R | |||