Escherichia coli NCTC9050 |
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Putative Escherichia coli NCTC9050 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,844,285 bp
GenBank #: UGBX00000000 (NZ_UGBX00000000)
REBASE acronym: Eco9050
Org_num: 43812
All begin NCTC9050_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2289 | restriction methylase | |||
| 2290 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNTGAA | M.Eco9050II |
| 2291 | S | S.Eco9095II (100% identity) | CCANNNNNNNTGAA | S.Eco9050II |
| 2292 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNTGAA | Eco9050IIP |
| 2293 | restriction methylase | |||
| 5254 | hydrolase | |||
| 5255 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco9050IP |
| 5256 | RNase III inhibitor | |||
| 5257 | Uncharacterised protein | |||
| 5258 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco9050I |
| 5259 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco9050I |
| 5260 | ybl103 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | phosphohydrolase | |||
| 36 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco9050DcmP |
| 37 | V | V.EcosEC7DcmP (100% identity) | V.Eco9050DcmP | |
| 38 | DMT superfamily transporter inner | |||
| 5713 | YfdA | |||
| 5714 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco9050ORF5714P |
| 5715 | cytoplasmic protein | |||
| 119 | Predicted ATP-binding protein involved in | |||
| 120 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.Eco9050III |
| 121 | phage replication protein | |||
| 492 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9050ORF493P | |
| 494 | transposase | |||
| 1098 | regulator | |||
| 1099 | M | M.EcoR50ORF11630P (100% identity) | M.Eco9050ORF1099P | |
| 1100 | Uncharacterised protein | |||
| 1586 | LexA repressor | |||
| 1587 | M | M.EcoTO6ORF3546P (100% identity) | GATC | M.Eco9050ORF1587P |
| 1588 | CPS-53 (KpLE1) prophage protein | |||
| 2285 | YjhS protein | |||
| 2286 | R | SflSTLE4ORF19250P (100% identity) | Eco9050ORF2286P | |
| 2287 | McrC family protein, McrBC 5-methylcytosine | |||
| 3544 | DamX protein | |||
| 3545 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9050DamP |
| 3546 | ribulose-phosphate 3-epimerase | |||
| 3653 | membrane protein | |||
| 3654 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco9050ORF3654P |
| 3655 | DNA-binding protein Fis | |||
| 5547 | lipoprotein | |||
| 5548 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco9050ORF5548P |
| 5554 | phage protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2286 | restriction endonuclease | |||
| 2287 | R | EcoR50McrCP (100% identity) | Eco9050McrCP | |
| 2288 | R | SflSTLE4McrBP (100% identity) | Eco9050McrBP | |
| 2289 | restriction methylase | |||