Escherichia coli NCTC9045 |
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Putative Escherichia coli NCTC9045 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,309,170 bp
GenBank #: UGDD00000000 (NZ_UGDD00000000)
REBASE acronym: Eco9045
Org_num: 43808
All begin NCTC9045_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4996 | methylated adenine and cytosine restriction | |||
| ??? | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco9045IP |
| 4999 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco9045I |
| ??? | S | S.EcosBORF22035P (98% identity) | TGANNNNNNNNTGCT | S.Eco9045I |
| 5004 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5930 | YfdA | |||
| 5931 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.Eco9045ORF5931P |
| 5932 | cytoplasmic protein | |||
| 463 | DamX protein | |||
| ??? | M | M.UbaC1152DamP (99% identity) | GATC | M.Eco9045DamP |
| 465 | ribulose-phosphate 3-epimerase | |||
| 607 | membrane protein | |||
| 608 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9045ORF608P |
| 609 | DNA-binding protein Fis | |||
| 1582 | phage protein | |||
| 1583 | M | M.EcoC9964ORF3559P (70% identity) | M.Eco9045ORF1583P | |
| 1584 | transcriptional activator from phage | |||
| 2359 | phosphohydrolase | |||
| ??? | M | M.EcoC4072DcmP (95% identity) | M.Eco9045DcmP | |
| ??? | V | V.SflN116DcmP (100% identity) | V.Eco9045DcmP | |
| 2364 | DMT superfamily transporter inner | |||
| 2491 | CPS-53 (KpLE1) prophage protein | |||
| 2492 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco9045ORF2492P |
| 2493 | LexA repressor | |||
| 2498 | lipoprotein | |||
| 2499 | M | M.EcoAVFP2ORFAP (100% identity) | M.Eco9045ORF2499P | |
| 2503 | TciA/TerB-like protein | |||
| 2902 | exonuclease from phage origin | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9045ORF2903P | |
| 2904 | prophage protein | |||
| 3465 | protein ninx | |||
| 3466 | M | M.EcoR11ORF20620P (99% identity) | GATC | M.Eco9045ORF3466P |
| 3467 | recombination protein ninB from phage origin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4995 | GTP-binding protein YjiA | |||
| 4996 | R | Ssp28760MrrP (100% identity) | Eco9045MrrP | |
| 4997 | type I restriction enzyme EcoKI subunit R | |||
| 5002 | specificity determinant for hsdM and hsdR | |||
| ??? | R | Ssp28760McrBP (100% identity) | Eco9045McrBP | |
| 5005 | R | Ssp28760McrCP (100% identity) | Eco9045McrCP | |
| 5006 | DEAD-box helicase-like protein | |||