Escherichia coli NCTC9021 |
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Putative Escherichia coli NCTC9021 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,989,560 bp
GenBank #: UGFX00000000 (NZ_UGFX00000000)
REBASE acronym: Eco9021
Org_num: 43795
All begin NCTC9021_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4969 | methylated adenine and cytosine restriction | |||
| ??? | R | Ssp28760ORF3465P (99% identity) | TGANNNNNNNNTGCT | Eco9021IP |
| 4973 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco9021I |
| ??? | S | S.EcoU90ORF3805P (100% identity) | TGANNNNNNNNTGCT | S.Eco9021I |
| 4976 | 5-methylcytosine-specific restriction enzyme | |||
| 5041 | CP4-6 prophage; partial regulator of insertion | |||
| 5042 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco9021ORF5042P | |
| 5043 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco9021ORF5042P | |
| 5044 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 460 | DamX protein | |||
| 461 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9021DamP |
| 462 | ribulose-phosphate 3-epimerase | |||
| 604 | membrane protein | |||
| 605 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9021ORF605P |
| 606 | DNA-binding protein Fis | |||
| 2318 | phosphohydrolase | |||
| 2319 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco9021DcmP |
| 2320 | V | V.SsoSE61DcmP (100% identity) | V.Eco9021DcmP | |
| 2321 | DMT superfamily transporter inner | |||
| 3963 | protein ninx | |||
| 3964 | M | M.EcoR11ORF20620P (100% identity) | GATC | M.Eco9021ORF3964P |
| 3965 | recombination protein ninB from phage origin | |||
| 5017 | YjhS protein | |||
| 5018 | R | EcoA71ORF22355P (100% identity) | Eco9021ORF5018P | |
| 5019 | Uncharacterised protein | |||
| 5022 | ATPase-like protein | |||
| ??? | RM | EcoR55ORF14870P (94% identity) | GCACAG | Eco9021II |
| 5030 | PglZ domain | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4968 | GTP-binding protein YjiA | |||
| 4969 | R | Ssp28760MrrP (100% identity) | Eco9021MrrP | |
| 4970 | type I restriction enzyme EcoKI subunit R | |||
| 4974 | specificity determinant for hsdM and hsdR | |||
| ??? | R | Ssp28760McrBP (100% identity) | Eco9021McrBP | |
| 4977 | R | Ssp28760McrCP (100% identity) | Eco9021McrCP | |