Escherichia coli NCTC13461 |
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Putative Escherichia coli NCTC13461 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,400,108 bp
GenBank #: UGDM00000000 (NZ_UGDM00000000)
REBASE acronym: Eco13461
Org_num: 43744
All begin NCTC13461_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3548 | protein YjiS | |||
| ??? | R | Ecou021ORF19870P (99% identity) | RTACNNNNGTG | Eco13461IIP |
| 3552 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco13461II |
| 3553 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco13461II |
| 3554 | restriction endonuclease | |||
| 3910 | Uncharacterised protein | |||
| 3913 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco13461I |
| 3914 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco13461I |
| 3915 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco13461IP |
| 3916 | Protein of unknwon function (DUF2893) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5259 | YfdA | |||
| 5260 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco13461ORF5260P |
| 5261 | cytoplasmic protein | |||
| 744 | DMT superfamily transporter inner | |||
| 745 | V | V.SflC32DcmP (74% identity) | V.Eco13461DcmP | |
| 746 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco13461DcmP |
| 747 | phosphohydrolase | |||
| 2251 | DNA-binding protein Fis | |||
| 2252 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco13461ORF2252P |
| 2253 | membrane protein | |||
| 2374 | ribulose-phosphate 3-epimerase | |||
| 2375 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13461Dam |
| 2376 | DamX protein | |||
| 2682 | ATPase-like protein | |||
| 2683 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco13461III |
| 2684 | PglZ domain | |||
| 3483 | transposase | |||
| 3484 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco13461IV |
| 3485 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco13461IV |
| 3486 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco13461IVP |
| 3487 | 5-methylcytosine restriction system component | |||
| 4608 | Uncharacterised protein | |||
| 4609 | M | M.KpnYN1ORFGP (89% identity) | M.Eco13461ORF4609P | |
| 4610 | transcriptional repressor DicA | |||
| 5055 | lipoprotein | |||
| 5056 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco13461ORF5056P |
| 5060 | anti-adapter protein IraM | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3486 | restriction endonuclease | |||
| 3487 | R | EcosS9McrCP (100% identity) | Eco13461McrCP | |
| 3488 | R | EcosS3McrBP (100% identity) | Eco13461McrBP | |
| 3489 | glycosyltransferase | |||