Escherichia coli NCTC11126 |
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Putative Escherichia coli NCTC11126 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,869,443 bp
GenBank #: UARS00000000 (NZ_UARS00000000)
REBASE acronym: Eco11126
Org_num: 43709
All begin NCTC11126_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3288 | Uncharacterized conserved protein | |||
| 3290 | S | S.SspS13ORF3945P (27% identity) | RTCANNNNNNNNGTGG | S2.Eco11126I |
| 3291 | S | S.SspS13ORF3945P (67% identity) | S1.Eco11126IP | |
| ??? | M | M.SspS13ORF3945P (83% identity) | RTCANNNNNNNNGTGG | M.Eco11126I |
| ??? | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco11126IP |
| 3297 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4433 | phosphohydrolase | |||
| ??? | M | M.SspS13DcmP (90% identity) | M.Eco11126DcmP | |
| 4436 | V | V.SsoSE61DcmP (100% identity) | V.Eco11126DcmP | |
| 4437 | DMT superfamily transporter inner | |||
| 1748 | transposase | |||
| 1749 | M | EspDC1ORF3956P (49% identity) | M.Eco11126ORF1749P | |
| 1750 | DEAD/DEAH box helicase | |||
| 2662 | DamX protein | |||
| 2663 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11126DamP |
| 2664 | ribulose-phosphate 3-epimerase | |||
| 2820 | membrane protein | |||
| ??? | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.Eco11126ORF2821P |
| 2823 | DNA-binding protein Fis | |||
| 2421 | Uncharacterised protein | |||
| ??? | R | Ecou021ORF20225P (99% identity) | Eco11126ORF2422P | |
| 2424 | Uncharacterised protein | |||
| 2428 | histidin kinase-like protein | |||
| 2429 | M | M.Sen5773ORF4471P (95% identity) | RCCGGY | M.Eco11126ORF2429P |
| 2430 | Uncharacterised protein | |||
| 1328 | replication protein for prophage | |||
| 1329 | M | M.EcoPSJ12ORF13470P (93% identity) | M.Eco11126ORF1329P | |
| 1330 | TraR/DksA family transcriptional regulator | |||
| 1508 | protein ninx | |||
| 1509 | M | M.EcoNT1F25ORFAP (99% identity) | GATC | M.Eco11126ORF1509P |
| 1510 | recombination protein ninB from phage origin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3284 | protein YjiS | |||
| 3285 | R | SflLIN8GmrSDP (34% identity) | Eco11126GmrSP | |
| ??? | R | EcoM1887GmrSDP (65% identity) | Eco11126GmrDP | |
| 3290 | Type I restriction enzyme EcoAI specificity | |||