Escherichia coli NCTC10959 |
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Putative Escherichia coli NCTC10959 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,479,092 bp
GenBank #: UGFN00000000 (NZ_UGFN00000000)
REBASE acronym: Eco10959
Org_num: 43684
All begin NCTC10959_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2826 | phage integrase | |||
| 2827 | R | Eco9056ORF4861P (99% identity) | GYTANNNNNNTGAR | Eco10959IIP |
| 2828 | Uncharacterised protein | |||
| 2829 | S | S.Eco62AORF21615P (63% identity) | GYTANNNNNNTGAR | S.Eco10959II |
| 2830 | M | M.Eco9091I (98% identity) | GYTANNNNNNTGAR | M.Eco10959II |
| 2831 | Uncharacterised protein | |||
| 3258 | Uncharacterised protein | |||
| ??? | R | Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | Eco10959IP |
| ??? | M | M.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | M.Eco10959I |
| 3264 | S | S.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | S.Eco10959I |
| 3266 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6181 | cytoplasmic protein | |||
| 6182 | M | M.Sso866ORF27155P (100% identity) | M.Eco10959ORF6182P | |
| 6183 | YfdA | |||
| 244 | phosphohydrolase | |||
| 245 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco10959DcmP |
| 246 | V | V.EcosEC7DcmP (100% identity) | V.Eco10959DcmP | |
| 247 | DMT superfamily transporter inner | |||
| 322 | phage protein | |||
| 323 | M | M.Sbo9733ORFFP (100% identity) | M.Eco10959ORF323P | |
| 324 | Uncharacterised protein | |||
| 1628 | plasmid stabilisation protein | |||
| 1629 | R | SsoST152ORF13040P (100% identity) | CTGCAG | Eco10959IIIP |
| 1630 | M | M.Sso8376ORF9905P (100% identity) | CTGCAG | M.Eco10959III |
| 1631 | bacteriophage protein | |||
| 4355 | DamX protein | |||
| ??? | M | M.EcoBone7DamP (93% identity) | M.Eco10959DamP | |
| 4357 | ribulose-phosphate 3-epimerase | |||
| 4490 | membrane protein | |||
| 4491 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco10959ORF4491P |
| 4492 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3266 | Uncharacterized conserved protein | |||
| 3267 | R | EcoSTEC508GmrSDP (81% identity) | Eco10959GmrSDP | |
| 3268 | protein YjiS | |||