|
Putative Escherichia coli NCTC10758 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,370,627 bp
GenBank #: UGAN00000000 (NZ_UGAN00000000)
REBASE acronym: Eco10758
Org_num: 43673
All begin NCTC10758_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5298 | Uncharacterised protein | |||
5299 | M | M.EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | M.Eco10758II |
5300 | S | S.EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | S.Eco10758II |
5301 | R | EcoR31ORF22360P (100% identity) | TAAYNNNNNNTTYG | Eco10758IIP |
5302 | morphogenetic protein | |||
737 | Uncharacterised protein | |||
738 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco10758I |
739 | Uncharacterized protein conserved in bacteria | |||
740 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco10758I |
741 | Uncharacterised protein | |||
742 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco10758IP |
743 | transposase | |||
2133 | Uncharacterised protein | |||
2134 | M | M.EcoSTEC346ORFGP (100% identity) | AGCANNNNNNNTAG | M.Eco10758III |
2135 | S | S.EcoTX1999ORF2159P (100% identity) | AGCANNNNNNNTAG | S.Eco10758III |
??? | R | Eco83906ORF4824P (99% identity) | AGCANNNNNNNTAG | Eco10758IIIP |
2139 | hydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
4985 | group II intron-encoded reverse transcriptase | |||
4987 | M | M.Ecocq9ORF29050P (100% identity) | M.Eco10758ORF4987P | |
4988 | cytoplasmic protein | |||
5213 | Uncharacterised protein | |||
??? | M | M.EcoDEC7EORF292P (83% identity) | M.Eco10758ORF5216P | |
5219 | recombination associated protein | |||
391 | DamX protein | |||
392 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10758DamP |
393 | ribulose-phosphate 3-epimerase | |||
520 | membrane protein | |||
521 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco10758ORF521P |
522 | DNA-binding protein Fis | |||
2068 | phosphohydrolase | |||
2069 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco10758DcmP |
2070 | V | V.SflSTLE3DcmP (100% identity) | V.Eco10758DcmP | |
2071 | DMT superfamily transporter inner | |||
2993 | phage protein | |||
2994 | M | M.Sbo812ORFAP (100% identity) | M.Eco10758ORF2994P | |
2995 | ybl17 | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2938 | isocitrate dehydrogenase | |||
2939 | R | EcosEC27McrCP (100% identity) | Eco10758McrCP | |
2940 | R | EcoteDMcrBP (100% identity) | Eco10758McrBP | |
2941 | acyltransferase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
1258 | TraR/DksA family transcriptional regulator | |||
1259 | M | M.EcoTX1999ORF3129P (100% identity) | M.Eco10758ORF1259P | |
1260 | replication protein for prophage |