Edwardsiella ictaluri NCTC12122 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Edwardsiella ictaluri NCTC12122 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,867,421 bp
GenBank #: UFXT00000000 (NZ_UFXT00000000)
REBASE acronym: Eic12122
Org_num: 43396
All begin NCTC12122_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 872 | NADH oxidoreductase hcr | |||
| 873 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic12122IP |
| 874 | Protein involved in cell division | |||
| 875 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic12122I |
| 876 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic12122I |
| 877 | Low specificity L-threonine aldolase | |||
| 1734 | Protein of uncharacterised function DUF45 | |||
| 1735 | R | EicORF3444P (100% identity) | RAACNNNNNGTC | Eic12122IIIP |
| 1736 | RNase III inhibitor | |||
| 1737 | Uncharacterised protein | |||
| 1738 | S | S.Eic773ORF15825P (100% identity) | RAACNNNNNGTC | S.Eic12122III |
| 1739 | M | M.EicORF3444P (100% identity) | RAACNNNNNGTC | M.Eic12122III |
| 1740 | Uncharacterised protein | |||
| 2225 | Uncharacterised protein | |||
| ??? | R | Eic773ORF155P (100% identity) | Eic12122ORF2228P | |
| 2228 | M | M.EicORF44P (100% identity) | M.Eic12122ORF2228P | |
| 2229 | S | S.EicORF44P (100% identity) | S.Eic12122ORF2228P | |
| 2230 | Transposase and inactivated derivatives | |||
| 2691 | Uncharacterized HTH-type transcriptional | |||
| 2692 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic12122II |
| 2693 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic12122II |
| 2694 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic12122IIP |
| 2695 | Uncharacterised protein | |||
| 3136 | Oligogalacturonate-specific porin kdgM | |||
| 3137 | M | M.EicORF1012P (100% identity) | GTCANNNNNNTGC | M.Eic12122IV |
| 3138 | S | S.EicORF1012P (100% identity) | GTCANNNNNNTGC | S.Eic12122IV |
| 3139 | R | EicORF1012P (100% identity) | GTCANNNNNNTGC | Eic12122IVP |
| 3140 | 5-methylcytosine-specific restriction enzyme B | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1457 | Uncharacterised protein | |||
| 1458 | M | M.EicORF3136P (100% identity) | M.Eic12122ORF1458P | |
| 1459 | Phage tail sheath protein | |||
| 1470 | Uncharacterised protein | |||
| 1471 | M | M.EicORF3149P (100% identity) | M.Eic12122ORF1471P | |
| 1472 | Predicted transcriptional regulator | |||
| 1909 | Ribulose-phosphate 3-epimerase | |||
| 1910 | M | M.EicYCHDamP (100% identity) | GATC | M.Eic12122Dam |
| 1911 | Uncharacterized protein conserved in bacteria | |||
| 3569 | Uncharacterised protein | |||
| 3570 | R | EicYCHORF6960P (100% identity) | Eic12122ORF3571P | |
| ??? | M | M.EicT11ORF6990P (100% identity) | M.Eic12122ORF3571P | |
| 3572 | V | V.EicYCHORF6960P (100% identity) | V.Eic12122ORF3571P | |
| 3573 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3139 | Type-1 restriction enzyme R protein | |||
| 3140 | R | Eic773McrBP (100% identity) | Eic12122McrBP | |
| 3141 | R | Eic773McrCP (100% identity) | Eic12122McrCP | |
| 3142 | Uncharacterised protein | |||