Putative Lactobacillus murinus V10 RM systems
Ref: Singer,J.R. et al. Nat. Med. 25 (11), 1772-1782 (2019)
REBASE ref # 30112
Sequence length: | GenBank #: | |
Chromosome: | 2,612,556 bp | CP040852 |
plasmid unnamed: | 110,390 bp | CP040853 |
REBASE acronym: LmuV10
Org_num: 39265
All begin FEE40_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1630 | 244 aa hypothetical protein | |||
1635 | V | V.Lmu147ORF10520P (97% identity) | V.LmuV10ORF1645P | |
1640 | R | R1.Gme92ORFV5P (95% identity) | R1.LmuV10ORF1645P | |
1645 | M | M.Lmu147ORF10520P (98% identity) | GATC | M.LmuV10ORF1645P |
1650 | R | R2.Gme92ORFV5P (68% identity) | R2.LmuV10ORF1645P | |
1655 | ISL3 family transposase | |||
9840 | 168 aa hypothetical protein | |||
9845 | M | M.LmuEF1ORFHP (98% identity) | M.LmuV10ORF9845P | |
9850 | 137 aa hypothetical protein | |||
9970 | IS256 family transposase | |||
9975 | RM | EfaAT44ORF13460P (60% identity) | LmuV10ORF9965BP | |
9980 | RM | Efa443FORFCBP (77% identity) | LmuV10ORF9965AP | |
9985 | DNA repair protein RecO | |||
10350 | 112 aa hypothetical protein | |||
10355 | M | M.Lmu1110ORF7905P (86% identity) | M.LmuV10ORF10355P | |
10360 | 74 aa hypothetical protein | |||
10655 | antirestriction protein ArdA | |||
10660 | RM | LmuEF1ORFEP (100% identity) | LmuV10ORF10660P | |
10665 | S | S.LmuEF1ORFEP (100% identity) | S.LmuV10ORF10660P | |
10670 | SEC10/PgrA surface exclusion domain-containing | |||
10955 | BREX-1 system phosphatase PglZ type A | |||
10960 | RM | Lmu361ORF462P (99% identity) | LmuV10ORF10960P | |
10965 | site-specific integrase | |||
10965 | site-specific integrase | |||
10970 | RM | Lsa72ORF810AP (34% identity) | LmuV10ORF10965P | |
10975 | IS3 family transposase | |||
10985 | helix-turn-helix domain-containing protein | |||
10990 | RM | Efa1024ORF2386P (17% identity) | LmuV10ORF10990BP | |
10995 | RM | Lmu361ORF464P (53% identity) | LmuV10ORF10990AP | |
11000 | BREX system P-loop protein BrxC | |||
11055 | Fic family protein | |||
11060 | M | M.LmuKD6ORF7060P (73% identity) | M.LmuV10ORF11060P | |
11065 | helicase | |||
11060 | 363 aa hypothetical protein | |||
11065 | RM | Lmu147ORF2510BP (98% identity) | LmuV10ORF11065P | |
11070 | restriction endonuclease | |||
11065 | helicase | |||
11070 | RM | Lmu147ORF2510AP (98% identity) | LmuV10ORF11070P | |
11075 | site-specific integrase | |||
plasmid unnamed | ||||
13310 | 228 aa hypothetical protein | |||
13315 | M | M1.Lma3596ORFFP (60% identity) | M.LmuV10ORF13315P | |
13320 | 260 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1085 | CtsR family transcriptional regulator | |||
1090 | R | LmuEF1ORFCP (99% identity) | LmuV10ORF1100P | |
1095 | 281 aa hypothetical protein | |||
??? | M | M.Sth90729ORFFP (79% identity) | M.LmuV10ORF1100P | |
1110 | porin | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5735 | (deoxy)nucleoside triphosphate | |||
5740 | R | LmuEF1ORFAP (99% identity) | LmuV10ORF5740P | |
5745 | IMP dehydrogenase |