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Putative Paenibacillus larvae subsp. larvae Eric_V RM systems
Ref: Beims,H. et al. Int. J. Med. Microbiol. 310 (2), 151394 (2020)
REBASE ref # 30142
Complete sequence: 4,672,437 bp
GenBank #: CP019717
REBASE acronym: PlacV
Org_num: 39354
All begin ERICV_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1943 | type I restriction enzyme EcoKI subunit R-like | |||
1944 | S | S.PlaPL006ORF22270P (93% identity) | S.PlacVORF1943P | |
1945 | DNA helicase | |||
4270 | 434 aa hypothetical protein | |||
4271 | R | PlaPL006ORF20425P (99% identity) | PlacVORF4273P | |
4272 | S | S.PlaMEX14ORFDP (99% identity) | S.PlacVORF4273P | |
4273 | M | M.PlaPL006ORF20425P (99% identity) | M.PlacVORF4273P | |
4274 | 84 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1526 | 152 aa hypothetical protein | |||
1527 | M | M.PlacVORF1743P (100% identity) | M.PlacVORF1527P | |
1528 | 56 aa hypothetical protein | |||
1742 | 152 aa hypothetical protein | |||
1743 | M | M.PlacVORF1527P (100% identity) | M.PlacVORF1743P | |
1744 | 56 aa hypothetical protein | |||
2030 | 127 aa hypothetical protein | |||
2031 | M | M.PlaPL006ORF3400P (98% identity) | M.PlacVORF2031P | |
2032 | 135 aa hypothetical protein | |||
2150 | 76 aa hypothetical protein | |||
2151 | M | M.PlacVORF3649P (89% identity) | M.PlacVORF2151P | |
2152 | 102 aa hypothetical protein | |||
2722 | 315 aa hypothetical protein | |||
2723 | R | PlaMEX14ORFEP (57% identity) | PlacVORF2731P | |
2724 | transposase | |||
2725 | transposase | |||
2726 | 57 aa hypothetical protein | |||
2727 | 55 aa hypothetical protein | |||
2728 | phage integrase family protein | |||
2729 | transposase | |||
2730 | 38 aa hypothetical protein | |||
2731 | M | M.PlaPL006ORF5680P (100% identity) | M.PlacVORF2731P | |
2732 | 114 aa hypothetical protein | |||
3214 | RNA polymerase sigma factor, sigma-70 family | |||
3215 | M | M.PlacVORF2031P (76% identity) | M.PlacVORF3215P | |
3216 | Modification methylase TaqI | |||
3215 | modification methylase | |||
3216 | M | M.PlaPL006ORF3395P (90% identity) | M.PlacVORF3216P | |
3217 | 127 aa hypothetical protein | |||
3329 | 102 aa hypothetical protein | |||
3330 | M | M.PlacVORF3649P (100% identity) | M.PlacVORF3330P | |
3331 | 173 aa hypothetical protein | |||
3648 | 102 aa hypothetical protein | |||
3649 | M | M.PlacVORF3330P (100% identity) | M.PlacVORF3649P | |
3650 | 173 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4290 | helix-turn-helix domain-containing protein | |||
4292 | R | PlaPL006ORF20335P (100% identity) | PlacVORF4292P | |
4293 | 169 aa hypothetical protein |