Escherichia coli 2018-06-4CC |
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Putative Escherichia coli 2018-06-4CC RM systems
Ref: Yamamoto,Y. et al. mSphere (2020) In press
REBASE ref # 30114
| Sequence length: | GenBank #: | |
| Chromosome: | 4,753,810 bp | AP021893 |
| Chromosome: | 4,753,810 bp | AP027889 |
REBASE acronym: Eco64CC
Org_num: 39273
All begin VEE72_, VEGS07_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3290 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco64CCDamP |
| 3310 | ribulose-phosphate 3-epimerase | |||
| 4490 | acrEF/envCD operon repressor | |||
| 4500 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco64CCORF4500P |
| 4510 | DNA-binding protein Fis | |||
| 17440 | 231 aa hypothetical protein | |||
| 17450 | M | M.Ecos195DcmP (100% identity) | CCWGG | M.Eco64CCDcmP |
| 17460 | V | V.Ecos195DcmP (100% identity) | V.Eco64CCDcmP | |
| 17470 | inner membrane transporter YedA | |||
| 29290 | replication endonuclease from | |||
| 29300 | M | M.SflLIN8ORF15450P (100% identity) | GATC | M.Eco64CCORF29300P |
| 29310 | 75 aa hypothetical protein | |||
| 34560 | transcriptional regulator | |||
| 34570 | R | Sso8033ORF3755P (99% identity) | Eco64CCORF34580P | |
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco64CCORF34580P | |
| 34590 | 257 aa hypothetical protein | |||
| 35160 | exonuclease | |||
| 35170 | M | M.Sbo812ORFAP (100% identity) | M.Eco64CCORF35170P | |
| 35180 | 71 aa hypothetical protein | |||
| 38710 | alkaline phosphatase | |||
| 38720 | RM | EcoD02AORF21370P (100% identity) | Eco64CCORF38720P | |
| 38730 | 1213 aa hypothetical protein | |||
| Chromosome | ||||
| 3260 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco064CCDamP |
| 3280 | ribulose-phosphate 3-epimerase | |||
| 4470 | acrEF/envCD operon repressor | |||
| 4480 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco064CCORF4480P |
| 4490 | DNA-binding protein Fis | |||
| 29150 | replication endonuclease from | |||
| 29160 | M | M.SflLIN8ORF15450P (100% identity) | GATC | M.Eco064CCORF29160P |
| 29170 | 75 aa hypothetical protein | |||
| 34430 | transcriptional regulator | |||
| 34440 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco064CCORF34450P |
| 34450 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco064CCORF34450P |
| 34460 | 257 aa hypothetical protein | |||
| 35030 | exonuclease | |||
| 35040 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco064CCORF35040P |
| 35050 | 71 aa hypothetical protein | |||
| 38550 | alkaline phosphatase | |||
| 38560 | RM | EcoD02AORF21370P (100% identity) | Eco064CCORF38560P | |
| 38570 | 1213 aa hypothetical protein | |||