Escherichia coli 2017.01.04CC |
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Putative Escherichia coli 2017.01.04CC RM systems
Ref: Yamamoto,Y. et al. mSphere (2020) In press
REBASE ref # 30114
Complete sequence: 4,615,626 bp
GenBank #: AP021891
REBASE acronym: Eco04CC
Org_num: 39271
All begin VEGS01_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | cell division protein DamX | |||
| 3230 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco04CCDamP |
| 3240 | ribulose-phosphate 3-epimerase | |||
| 4380 | acrEF/envCD operon repressor | |||
| 4390 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco04CCORF4390P |
| 4400 | DNA-binding protein Fis | |||
| 16860 | phosphohydrolase | |||
| 16870 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco04CCDcmP |
| 16880 | V | V.SflFF64DcmP (100% identity) | V.Eco04CCDcmP | |
| 16890 | multidrug transporter | |||
| 37400 | transcriptional regulator | |||
| 37410 | R | EcoF1022ORF41330P (100% identity) | Eco04CCORF37410P | |
| 37420 | 124 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 36700 | GTP-binding protein YjiA | |||
| 36710 | R | Ssp28760MrrP (100% identity) | Eco04CCMrrP | |
| 36720 | insertion element IS1 protein InsB | |||