Escherichia coli 2017.15.01CC |
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Putative Escherichia coli 2017.15.01CC RM systems
Ref: Yamamoto,Y. et al. mSphere (2020) In press
REBASE ref # 30114
Complete sequence: 4,869,407 bp
GenBank #: AP021890
REBASE acronym: Eco01CC
Org_num: 39270
All begin VEGS12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7840 | 61 aa hypothetical protein | |||
| 7850 | R | EcosE1ORFHP (96% identity) | Eco01CCORF7870P | |
| 7860 | S | S.EcosE1ORFHP (100% identity) | S.Eco01CCORF7870P | |
| 7870 | M | M.EcosE1ORFHP (93% identity) | M.Eco01CCORF7870P | |
| 7880 | 290 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | phage replication protein | |||
| 20 | M | M.SflFF38ORF15P (100% identity) | M.Eco01CCORF20P | |
| 30 | 329 aa hypothetical protein | |||
| 13250 | 75 aa hypothetical protein | |||
| 13260 | M | M.SflLIN8ORF15450P (100% identity) | GATC | M.Eco01CCORF13260P |
| 13270 | replication endonuclease from | |||
| 25420 | multidrug transporter | |||
| 25430 | V | V.SsoSE61DcmP (100% identity) | V.Eco01CCDcmP | |
| 25440 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco01CCDcmP |
| 25450 | phosphohydrolase | |||
| 29240 | 89 aa hypothetical protein | |||
| 29250 | M | M.Eco1CCORF35580P (100% identity) | M.Eco01CCORF29250P | |
| 29260 | protein ninB | |||
| 31340 | transcriptional activator | |||
| 31350 | M | M.EcosE1ORFEP (100% identity) | M.Eco01CCORF31350P | |
| 31360 | 64 aa hypothetical protein | |||
| 38650 | DNA-binding protein Fis | |||
| 38660 | M | M.Eco803RtORF2540P (100% identity) | ATGCAT | M.Eco01CCORF38660P |
| 38670 | acrEF/envCD operon transcriptional regulator | |||
| 39670 | ribulose-phosphate 3-epimerase | |||
| 39680 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco01CCDamP |
| 39690 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7580 | 141 aa hypothetical protein | |||
| 7590 | R | SflN97McrBP (100% identity) | Eco01CCMcrBP | |
| 7600 | R | SflN97McrCP (100% identity) | Eco01CCMcrCP | |
| 7610 | IS5 family transposase | |||