Klebsiella variicola 118 |
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Putative Klebsiella variicola 118 RM systems
Ref: Nuesch-Inderbinen,M. et al. unpublished
REBASE ref # 30123
| Sequence length: | GenBank #: | |
| Chromosome: | 5,601,806 bp | CP048379 |
| plasmid p118_A: | 244,254 bp | CP048380 |
| plasmid p118_B-OXA1: | 164,790 bp | CP048381 |
REBASE acronym: Kva118
Org_num: 39341
All begin GZS05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p118_A | ||||
| 28270 | ISL3-like element ISKpn25 family transposase | |||
| 28275 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | Kva118ORF28285P |
| 28280 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.Kva118ORF28285P |
| 28285 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.Kva118ORF28285P |
| 28290 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.KpnYH43DamP (99% identity) | GATC | M.Kva118DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 6480 | 63 aa hypothetical protein | |||
| 6485 | M | M.Kpn53322ORF6670P (100% identity) | M.Kva118ORF6485P | |
| 6490 | MmcB family DNA repair protein | |||
| 7390 | NinG family protein | |||
| 7395 | M | M.Kox9186ORF2149P (98% identity) | M.Kva118ORF7395P | |
| 7400 | DUF1133 family protein | |||
| 8295 | phage N-6-adenine-methyltransferase | |||
| 8300 | M | M.KvaZH07ORF7790P (99% identity) | M.Kva118ORF8300P | |
| 8305 | SOS-response repressor and protease LexA | |||
| 8330 | TrmB family transcriptional regulator | |||
| 8335 | M | M.Kpn2343ORF9450P (99% identity) | M.Kva118ORF8335P | |
| 8345 | 146 aa hypothetical protein | |||
| 9825 | phosphohydrolase | |||
| ??? | M | M.KpnHNf2ORF15140P (98% identity) | CCWGG | M.Kva118ORF9830P |
| 9835 | V | V.KvaMx2ORF120009P (98% identity) | V.Kva118ORF9830P | |
| 9840 | drug/metabolite exporter YedA | |||
| 24300 | DUF262 domain-containing protein | |||
| 24305 | RM | KpnFF79ORF22900P (98% identity) | Kva118ORF24305AP | |
| 24310 | 162 aa hypothetical protein | |||
| 24315 | RNA-directed DNA polymerase | |||
| 24320 | RM | KpnFF79ORF22915P (100% identity) | Kva118ORF24305BP | |
| 24325 | BREX-1 system phosphatase PglZ type A | |||
| plasmid p118_A | ||||
| 28340 | 38 aa hypothetical protein | |||
| 28345 | M | M.SmaBWH35ORF25885P (100% identity) | M.Kva118ORF28345P | |
| 28350 | 73 aa hypothetical protein | |||
| plasmid p118_B-OXA1 | ||||
| 29070 | 91 aa hypothetical protein | |||
| ??? | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Kva118ORF29075P |
| 29080 | R | YpsR1ORFAP (100% identity) | CCWGG | Kva118ORF29075P |
| 29085 | EAL domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8290 | PerC family transcriptional regulator | |||
| 8295 | M | M.KvaZH07ORF7785P (99% identity) | M.Kva118ORF8295P | |
| 8300 | DNA cytosine methyltransferase | |||