Escherichia coli 142 |
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Putative Escherichia coli 142 RM systems
Ref: Nuesch-Inderbinen,M. et al. unpublished
REBASE ref # 30123
| Sequence length: | GenBank #: | |
| Chromosome: | 5,073,188 bp | CP048337 |
| plasmid p142_A-OXA181: | 155,486 bp | CP048338 |
REBASE acronym: Ecos142
Org_num: 39317
All begin GZS12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9680 | IS3 family transposase | |||
| 9685 | M | M.Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | M.Ecos142ORF9685P |
| 9690 | S | S.Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | S.Ecos142ORF9685P |
| 9695 | YecA family protein | |||
| 9700 | cold shock domain-containing protein | |||
| 9705 | R | EcoSCU120ORF25100P (100% identity) | GATGNNNNNNTAC | Ecos142ORF9685P |
| 9710 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1870 | cell division protein DamX | |||
| 1875 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecos142DamP |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 2400 | DUF2556 domain-containing protein | |||
| 2405 | M | M.Ecoi648ORF527P (100% identity) | ATGCAT | M.Ecos142ORF2405P |
| 2410 | DNA-binding transcriptional regulator Fis | |||
| 9420 | phosphohydrolase | |||
| 9425 | M | M.Ecoi68DcmP (100% identity) | CCWGG | M.Ecos142DcmP |
| 9430 | V | V.Ecoi68DcmP (100% identity) | V.Ecos142DcmP | |
| 9435 | drug/metabolite exporter YedA | |||
| 13115 | DUF3927 domain-containing protein | |||
| 13130 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Ecos142ORF13130P |
| 13135 | TrmB family transcriptional regulator | |||
| 15615 | replication endonuclease | |||
| 15620 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Ecos142ORF15620P |
| 15625 | TraR/DksA family transcriptional regulator | |||
| 20085 | phage lysis protein EssD | |||
| 20090 | M | M.EcoUTORF5110P (100% identity) | M.Ecos142ORF20090P | |
| 20095 | 67 aa hypothetical protein | |||
| 20125 | LexA family transcriptional regulator | |||
| 20130 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Ecos142ORF22195P |
| 20135 | PerC family transcriptional regulator | |||
| 20575 | helix-turn-helix domain-containing protein | |||
| 20580 | R | Ecos2AORF6710P (99% identity) | GAAC | Ecos142ORF20530P |
| 20585 | integrase | |||
| plasmid p142_A-OXA181 | ||||
| 25020 | 73 aa hypothetical protein | |||
| 25025 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Ecos142ORF25025P |
| 25030 | 102 aa hypothetical protein | |||