Escherichia coli 9 |
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Putative Escherichia coli 9 RM systems
Ref: Nuesch-Inderbinen,M. et al. unpublished
REBASE ref # 30123
| Sequence length: | GenBank #: | |
| Chromosome: | 4,959,978 bp | CP048304 |
| plasmid p009_A: | 159,959 bp | CP048305 |
| plasmid p009_B: | 110,182 bp | CP048306 |
REBASE acronym: Ecos9
Org_num: 39328
All begin GZS17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22260 | restriction endonuclease | |||
| 22265 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Ecos9ORF22265P |
| 22270 | S | S.EcoKI683ORF746P (100% identity) | RTACNNNNGTG | S.Ecos9ORF22265P |
| 22275 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Ecos9ORF22265P |
| 22280 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3680 | cell division protein DamX | |||
| 3685 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecos9DamP |
| 3690 | ribulose-phosphate 3-epimerase | |||
| 4280 | DUF2556 domain-containing protein | |||
| 4285 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecos9ORF4285P |
| 4290 | DNA-binding transcriptional regulator Fis | |||
| 11525 | phosphohydrolase | |||
| 11530 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Ecos9DcmP |
| 11535 | V | V.EcosC25DcmP (100% identity) | V.Ecos9DcmP | |
| 11540 | drug/metabolite exporter YedA | |||
| 22605 | McrC family protein | |||
| 22610 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Ecos9ORF22615P |
| 22615 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Ecos9ORF22615P |
| 22620 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Ecos9ORF22615P |
| 22625 | IS3 family transposase | |||
| 22975 | 174 aa hypothetical protein | |||
| 22980 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Ecos9ORF22980P |
| 22985 | histidine kinase | |||
| 22990 | 607 aa hypothetical protein | |||
| 22995 | R | EcosEC2ORF20400P (100% identity) | Ecos9ORF22995P | |
| 23000 | 97 aa hypothetical protein | |||
| plasmid p009_A | ||||
| 24175 | 100 aa hypothetical protein | |||
| 24180 | M | M.YrupYR1ORFCP (100% identity) | M.Ecos9ORF24180P | |
| 24185 | 158 aa hypothetical protein | |||
| plasmid p009_B | ||||
| 25135 | 76 aa hypothetical protein | |||
| 25140 | M | M.EcoPSUO78ORF25955P (100% identity) | M.Ecos9ORF25140P | |
| 25145 | 269 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22595 | glycosyltransferase family 2 protein | |||
| 22600 | R | EcosS3McrBP (100% identity) | Ecos9McrBP | |
| 22605 | R | EcosS9McrCP (100% identity) | Ecos9McrCP | |
| 22610 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15445 | NinE family protein | |||
| 15450 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Ecos9ORF15450P |
| 15455 | recombination protein NinB | |||