Escherichia coli 164 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 164 RM systems
Ref: Nuesch-Inderbinen,M. et al. unpublished
REBASE ref # 30123
| Sequence length: | GenBank #: | |
| Chromosome: | 4,819,649 bp | CP048371 |
| plasmid pC-F-163_A: | 90,244 bp | CP048372 |
| plasmid pC-F-163_B: | 71,270 bp | CP048373 |
REBASE acronym: Ecos164
Org_num: 39319
All begin GZS07_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecos164DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 domain-containing protein | |||
| 2255 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Ecos164ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 9245 | phosphohydrolase | |||
| 9250 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Ecos164DcmP |
| 9255 | V | V.SsoSE61DcmP (100% identity) | V.Ecos164DcmP | |
| 9260 | drug/metabolite exporter YedA | |||
| 17825 | zinc ribbon domain-containing protein | |||
| 17830 | M | M.EcoY13ORF17950P (100% identity) | GGTACC | M.Ecos164ORF17830P |
| 17835 | tyrosine-type recombinase/integrase | |||
| plasmid pC-F-163_A | ||||
| 22985 | 102 aa hypothetical protein | |||
| 22990 | M | M.SenST46ORF25580P (100% identity) | M.Ecos164ORF22990P | |
| 22995 | 73 aa hypothetical protein | |||
| plasmid pC-F-163_B | ||||
| 23535 | 103 aa hypothetical protein | |||
| 23540 | M | M.Ssp14523ORF22990P (100% identity) | M.Ecos164ORF23540P | |
| 23545 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9095 | prepilin-type N-terminal cleavage/methylation | |||
| 9100 | R | EcoU1IP (100% identity) | ATCACC | Ecos164ORF9105P |
| 9105 | M | M.EcoU1I (100% identity) | ATCACC | M.Ecos164ORF9105P |
| 9110 | integrase arm-type DNA-binding domain-containing | |||
| 17740 | 97 aa hypothetical protein | |||
| 17745 | R | EcoY13ORF17870P (100% identity) | ACCACC | Ecos164ORF17750P |
| 17750 | M | M.EcoY13ORF17870P (100% identity) | ACCACC | M.Ecos164ORF17750P |
| 17755 | S8 family peptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17690 | 141 aa hypothetical protein | |||
| 17695 | R | EcoY13McrBP (100% identity) | Ecos164McrBP | |
| 17700 | R | SflN97McrCP (100% identity) | Ecos164McrCP | |
| 17705 | DUF3387 domain-containing protein | |||