Mycolicibacterium alvei JCM 12272 |
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Putative Mycolicibacterium alvei JCM 12272 RM systems
Ref: Matsumoto,Y. et al. Emerg Microbes Infect 8 (1), 1043-1053 (2019)
REBASE ref # 30021
| Sequence length: | GenBank #: | |
| Chromosome: | 5,712,683 bp | AP022565 |
| plasmid pJCM12272: | 304,163 bp | AP022566 |
REBASE acronym: Mal12272
Org_num: 38845
All begin MALV_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1490 | 76 aa hypothetical protein | |||
| 1500 | M | M.MspSMC2ORF5610P (85% identity) | M.Mal12272ORF1500P | |
| 1510 | S | S.CspJZ16ORF6300P (41% identity) | S.Mal12272ORF1500P | |
| 1520 | R | PspYJ56ORF8935P (80% identity) | Mal12272ORF1500P | |
| 1530 | ATPase | |||
| 5230 | 144 aa hypothetical protein | |||
| 5240 | R | MfoW6ORF20315P (94% identity) | Mal12272ORF5270P | |
| 5250 | 297 aa hypothetical protein | |||
| 5260 | S | S.Msm623ORF1239P (50% identity) | S.Mal12272ORF5270P | |
| 5270 | M | M.MchM77ORF17785P (91% identity) | M.Mal12272ORF5270P | |
| 5280 | 221 aa hypothetical protein | |||
| 51600 | DNA polymerase III subunit epsilon | |||
| 51610 | S | S.Mst901ORF1471P (41% identity) | S.Mal12272ORF51620P | |
| 51620 | M | M.MfoKORF24240P (94% identity) | M.Mal12272ORF51620P | |
| 51630 | 118 aa hypothetical protein | |||
| plasmid pJCM12272 | ||||
| 58370 | type II restriction endonuclease subunit M | |||
| 58380 | M | M.MspTY81ORF48810P (96% identity) | M.Mal12272ORF58380P | |
| 58390 | S | S.SroAN4ORF2731P (75% identity) | S.Mal12272ORF58380P | |
| 58400 | R | MspTY81ORF48810P (96% identity) | Mal12272ORF58380P | |
| 58410 | 437 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1350 | 108 aa hypothetical protein | |||
| 1360 | M | M.Msa13016ORF24040P (67% identity) | M.Mal12272ORF1360P | |
| 1370 | 331 aa hypothetical protein | |||
| 8360 | 314 aa hypothetical protein | |||
| 8370 | RM | NspJSORF4784P (71% identity) | Mal12272ORF8370P | |
| 8380 | helicase SNF2 family protein | |||
| 9260 | ABC transporter ATP-binding protein | |||
| 9270 | R | MboC014ORF27050P (95% identity) | Mal12272ORF9280P | |
| 9280 | M | M.MseC012ORF19750P (89% identity) | M.Mal12272ORF9280P | |
| 9290 | phosphoribosyl-AMP cyclohydrolase | |||
| 25580 | chromosome segregation protein SMC | |||
| 25590 | RM | MsmRabORF6350P (83% identity) | Mal12272ORF25590P | |
| 25600 | helicase | |||
| 25660 | 1570 aa hypothetical protein | |||
| 25670 | M | M.MseMORF4460P (98% identity) | M.Mal12272ORF25670P | |
| 25680 | V | V.MseMORF4460P (97% identity) | V.Mal12272ORF25670P | |
| plasmid pJCM12272 | ||||
| 55540 | 247 aa hypothetical protein | |||
| 55550 | M | M.Mpe25866ORF16985P (98% identity) | M.Mal12272ORF55550P | |
| 55560 | 150 aa hypothetical protein | |||
| 56320 | 70 aa hypothetical protein | |||
| 56330 | M | M.Mpe25866ORF30090P (100% identity) | M.Mal12272ORF56330P | |
| 56340 | 44 aa hypothetical protein | |||