Klebsiella pneumoniae C2315 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae C2315 RM systems
Ref: Gao,H. et al. EBioMedicine 51, 102599 (2020)
REBASE ref # 29945
| Sequence length: | GenBank #: | |
| Chromosome: | 5,082,253 bp | CP039828 |
| plasmid pC2315-2-NDM: | 317,231 bp | CP039829 |
| plasmid pC2315-3: | 207,489 bp | CP039830 |
| plasmid pC2315-4-KPC: | 175,540 bp | CP039831 |
REBASE acronym: Kpn2315
Org_num: 38608
All begin FBF54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20940 | ATPase | |||
| 20945 | R | Kpn2343ORF16545P (100% identity) | Kpn2315ORF20955P | |
| 20950 | S | S.KpnK307ORF23680P (100% identity) | S.Kpn2315ORF20955P | |
| 20955 | M | M.Kpn2343ORF16545P (100% identity) | M.Kpn2315ORF20955P | |
| 20960 | IS1 family transposase | |||
| plasmid pC2315-3 | ||||
| 27630 | DUF262 domain-containing protein | |||
| 27635 | M | M.Kpn2343ORF28165P (100% identity) | CAGNNNNNNRTGT | M.Kpn2315ORF27635P |
| 27640 | S | S.Kpn2343ORF28165P (100% identity) | CAGNNNNNNRTGT | S.Kpn2315ORF27635P |
| 27645 | R | Kpn2343ORF28165P (100% identity) | CAGNNNNNNRTGT | Kpn2315ORF27635P |
| 27650 | DNA modification methylase | |||
| 27905 | IS1 family transposase | |||
| 27910 | M | M.Kpn2343ORF28440P (100% identity) | M.Kpn2315ORF27910P | |
| 27920 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2095 | 152 aa hypothetical protein | |||
| 2100 | M | M.Kpn2343ORF9495P (100% identity) | M.Kpn2315ORF2100P | |
| 2105 | DNA cytosine methyltransferase | |||
| 2100 | phage N-6-adenine-methyltransferase | |||
| 2105 | M | M.Kpn2343ORF9490P (100% identity) | M.Kpn2315ORF2105P | |
| 2110 | SOS-response repressor and protease LexA | |||
| 2140 | TrmB family transcriptional regulator | |||
| 2145 | M | M.Kpn2343ORF9450P (100% identity) | M.Kpn2315ORF2145P | |
| 2155 | 146 aa hypothetical protein | |||
| 8630 | drug/metabolite exporter YedA | |||
| 8635 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn2315DcmP | |
| 8640 | M | M.KspC31ORFBP (100% identity) | CCWGG | M.Kpn2315DcmP |
| 8645 | phosphohydrolase | |||
| 10460 | antitermination protein | |||
| 10465 | M | M.Kpn2343ORF1230P (100% identity) | M.Kpn2315ORF10465P | |
| 10470 | NinG family protein | |||
| 15910 | ribulose-phosphate 3-epimerase | |||
| 15915 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn2315DamP |
| 15920 | cell division protein DamX | |||
| plasmid pC2315-2-NDM | ||||
| 25770 | 144 aa hypothetical protein | |||
| ??? | M | M.RplS62ORF30840P (99% identity) | M.Kpn2315ORF25775P | |
| 25780 | R | RplS62ORF30840P (100% identity) | Kpn2315ORF25775P | |
| 25785 | 82 aa hypothetical protein | |||
| 25860 | 81 aa hypothetical protein | |||
| 25865 | M | M.RplS62ORF30940P (100% identity) | M.Kpn2315ORF25865P | |
| 25870 | 1126 aa hypothetical protein | |||
| plasmid pC2315-4-KPC | ||||
| 28850 | 76 aa hypothetical protein | |||
| 28855 | M | M.Kqu19001ORF26435P (100% identity) | M.Kpn2315ORF28855P | |
| 28860 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20930 | IS5 family transposase | |||
| 20935 | R | KpnK307McrCP (100% identity) | Kpn2315McrCP | |
| 20940 | R | Kpn2343McrBP (100% identity) | Kpn2315McrBP | |
| 20945 | type I restriction endonuclease subunit R | |||