Klebsiella pneumoniae C2972 |
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Putative Klebsiella pneumoniae C2972 RM systems
Ref: Gao,H. et al. EBioMedicine 51, 102599 (2020)
REBASE ref # 29945
| Sequence length: | GenBank #: | |
| Chromosome: | 5,378,440 bp | CP039802 |
| plasmid pC2972-2: | 214,331 bp | CP039803 |
| plasmid pC2972-4-KPC: | 97,386 bp | CP039805 |
| plasmid pC2972-6: | 35,466 bp | CP039807 |
REBASE acronym: Kpn2972
Org_num: 38613
All begin FBF57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14665 | S | S.Kpn2974ORF11830P (100% identity) | ACANNNNNNNNTGAC | S.Kpn2972ORF14675P |
| 14670 | IS5-like element ISKpn26 family transposase | |||
| 14675 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn2972ORF14675P |
| ??? | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn2972ORF14675P |
| 14685 | DUF4102 domain-containing protein | |||
| 18295 | ATP-binding protein | |||
| 18300 | R | Pmi8ORF105P (100% identity) | Kpn2972ORF18315P | |
| 18305 | anticodon nuclease | |||
| 18310 | S | S.Vch10432ORF3652P (100% identity) | S.Kpn2972ORF18315P | |
| 18315 | M | M.VchSa5YORF2649P (100% identity) | M.Kpn2972ORF18315P | |
| 18320 | helix-turn-helix transcriptional regulator | |||
| plasmid pC2972-2 | ||||
| 26745 | IS1 family transposase | |||
| 26750 | M | M.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | M.Kpn2972ORF26750P |
| 26755 | S | S.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | S.Kpn2972ORF26750P |
| 26760 | YecA family protein | |||
| 26765 | cold shock domain-containing protein | |||
| 26770 | R | KpnRT11ORF25835P (100% identity) | GTGANNNNNNNTGG | Kpn2972ORF26750P |
| 26775 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 70 | phosphohydrolase | |||
| 75 | M | M.Ksp1954ORF23690P (100% identity) | CCWGG | M.Kpn2972ORF75P |
| 80 | very short patch repair endonuclease | |||
| 75 | DNA cytosine methyltransferase | |||
| 80 | V | V.KspC31DcmP (75% identity) | V.Kpn2972DcmP | |
| 85 | drug/metabolite exporter YedA | |||
| 5190 | tellurite/colicin resistance protein | |||
| 5200 | M | M.Kpn2974ORF21310P (100% identity) | M.Kpn2972ORF5200P | |
| 5205 | TrmB family transcriptional regulator | |||
| 5230 | SOS-response repressor and protease LexA | |||
| 5235 | M | M.Kpn2974ORF21275P (100% identity) | M.Kpn2972ORF5235P | |
| 5240 | phage N-6-adenine-methyltransferase | |||
| 7655 | RusA family crossover junction | |||
| 7660 | M | M.Kva13450ORF17370P (100% identity) | M.Kpn2972ORF7660P | |
| 7665 | transcriptional regulator | |||
| 7705 | 114 aa hypothetical protein | |||
| 7710 | M | M.KvaS01ORF16980P (100% identity) | M.Kpn2972ORF7710P | |
| 7715 | 91 aa hypothetical protein | |||
| 19565 | cell division protein DamX | |||
| 19570 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn2972DamP |
| 19575 | ribulose-phosphate 3-epimerase | |||
| plasmid pC2972-2 | ||||
| 27815 | 76 aa hypothetical protein | |||
| 27820 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpn2972ORF27820P | |
| 27825 | 73 aa hypothetical protein | |||
| plasmid pC2972-4-KPC | ||||
| 28565 | serine recombinase | |||
| ??? | M | M.RplS62ORF32505P (100% identity) | M.Kpn2972ORF28570P | |
| 28575 | R | RplS62ORF32505P (99% identity) | Kpn2972ORF28570P | |
| 28580 | ABC transporter | |||
| 28625 | 64 aa hypothetical protein | |||
| 28630 | M | M.Ror218ORF590P (100% identity) | M.Kpn2972ORF28630P | |
| 28635 | 73 aa hypothetical protein | |||
| plasmid pC2972-6 | ||||
| 29455 | helix-turn-helix transcriptional regulator | |||
| 29460 | RM | KpnWS292ORF30440P (100% identity) | Kpn2972ORF29460P | |
| 29465 | ATP-dependent helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5235 | DNA cytosine methyltransferase | |||
| 5240 | M | M.Kpn2974ORF21270P (100% identity) | M.Kpn2972ORF5240P | |
| 5245 | PerC family transcriptional regulator | |||